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[bioontology-support] Software Ontology

Trish Whetzel whetzel at
Thu Dec 3 09:34:00 PST 2009

Hi James,

Very much interested to see the Software Ontology. Has the location of  
this ontology been included in your SVN repository file for the  
automatic pull?
***Misha, can you confirm if anything additional to the repository  
file is needed to include this ontology in the automatic pull?

James, do you have mappings generated for the Software Ontology? Also,  
would it make sense to load this as a 'view' of EFO - is this a subset  
of EFO or does this extend from the software class in EFO? I can talk  
to via Skype about views further if you like.


On Dec 3, 2009, at 9:17 AM, James Malone wrote:

> Hi,
> We have had a project working on creating a software ontology that  
> we needed for a branch of EFO. We've kept it separate though so it  
> can be reused as separate ontology. I'd like to get this Software  
> Ontology uploaded to BioPortal if possible please!  I've uploaded to  
> our public SVN, but can you let me know what details you require for  
> me to get it uploaded to BioPortal. I guess you might need some  
> extra bits like a description etc.
> Many thanks in advance!
> James
> -- 
> European Bioinformatics Institute, Wellcome Trust Genome Campus,  
> Hinxton, Cambridge, CB10 1SD, United Kingdom
> Tel: + 44 (0) 1223 494 676
> Fax: + 44 (0) 1223 492 468
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> bioontology-support mailing list
> bioontology-support at

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