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[bioontology-support] Resources in BioPortal

Trish Whetzel whetzel at stanford.edu
Wed Jul 29 12:32:34 PDT 2009


Hi James, 

The annotations for Array Express have finished processing and are visible
now.

Trish


>-----Original Message-----
>From: James Malone [mailto:malone at ebi.ac.uk]
>Sent: Wednesday, July 29, 2009 1:46 AM
>To: Trish Whetzel
>Cc: support at bioontology.org; 'Helen Parkinson'
>Subject: Re: [bioontology-support] Resources in BioPortal
>
>That's great, thanks Trish.
>
>James
>
>
>
>Trish Whetzel wrote:
>> Hi James,
>>
>> Array Express is being re-processed and results should be visible in
>the
>> next two days. Apologies for not having a better message in the result
>to
>> indicate this. Will this timeframe fit your needs?
>>
>> Trish
>>
>>
>>
>>> -----Original Message-----
>>> From: bioontology-support-bounces at lists.stanford.edu
>>> [mailto:bioontology-support-bounces at lists.stanford.edu] On Behalf Of
>>> James Malone
>>> Sent: Tuesday, July 28, 2009 5:11 AM
>>> To: support at bioontology.org
>>> Cc: Helen Parkinson
>>> Subject: [bioontology-support] Resources in BioPortal
>>>
>>> Hi,
>>>
>>> I was curious about the resources link in BioPortal. I don't seem to
>get
>>> any matches anymore to ArrayExpress data, e.g. if I query melanoma in
>>> EFO and then resources I get GEO data (98) and some others but
>nothing
>>> for ArrayExpress (and there is definitely data in AE for this).  Is
>>> there some reason for this?  I was hoping to put a small section in
>our
>>> EFO journal paper about linking data you see.
>>>
>>> Cheers,
>>>
>>> James
>>>
>>> --
>>> European Bioinformatics Institute,
>>> Wellcome Trust Genome Campus,
>>> Hinxton,
>>> Cambridge, CB10 1SD,
>>> United Kingdom
>>> Tel: + 44 (0) 1223 494 676
>>> Fax: + 44 (0) 1223 492 468
>>>
>>> _______________________________________________
>>> bioontology-support mailing list
>>> bioontology-support at lists.stanford.edu
>>> https://mailman.stanford.edu/mailman/listinfo/bioontology-support
>>>
>
>
>--
>European Bioinformatics Institute,
>Wellcome Trust Genome Campus,
>Hinxton,
>Cambridge, CB10 1SD,
>United Kingdom
>Tel: + 44 (0) 1223 494 676
>Fax: + 44 (0) 1223 492 468





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