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[bioontology-support] Mappings from EFO to other ontologies
whetzel at stanford.edu
Fri Mar 6 08:18:24 PST 2009
No problem, just wanted to check.
WRT to the TAIR reference, is there a way to download that, ie does it exist
in an ontology file?
>From: James Malone [mailto:malone at ebi.ac.uk]
>Sent: Friday, March 06, 2009 8:06 AM
>To: Trish Whetzel
>Cc: 'Helen Parkinson'; support at bioontology.org
>Subject: Re: Mappings from EFO to other ontologies
>Apologies for slow reply.
>For items below:
>> EFO_0000002 CS57511
> This is an Arabidopsis thaliana strain as described in TAIR Just
>realised TAIR is not in BioPortal...
>> EFO_0001058 sensory system disease A sensory system disease is a
>> disease which has as location the sensory system.
>This has no external mapping, sorry this is an error - the definition is
>in the wrong annotation property! Will fix it now.
>> EFO_0000322 cell line Atwood et al (2000) OED of Biochemistry
>> Molecular Biology, Oxford University Press.
>Citation here is a book, please ignore this.
>> EFO_0000746 proteomic profiling ArrayExpress production team
>Again, please ignore, these are people rather than external things. I
>need to filter these somehow...
>> Not quite sure what they should be mapped to.
>European Bioinformatics Institute,
>Wellcome Trust Genome Campus,
>Cambridge, CB10 1SD,
>Tel: + 44 (0) 1223 494 676
>Fax: + 44 (0) 1223 492 468
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