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[bioontology-support] [POSSIBLE VIRUS:###] Re: Bioportal mappings

Trish Whetzel whetzel at stanford.edu
Thu Nov 12 20:52:41 PST 2009


Attached are the mappings.

Trish




On Nov 12, 2009, at 8:38 AM, Trish Whetzel wrote:

> Hi Quentin,
>
> That might be possible since there are 145,240 - 165,185 mappings  
> for these ontologies. I'll check on other options to provide this  
> mapping information to you.
>
> Trish
>
>
> On Nov 12, 2009, at 4:53 AM, Quentin Reul wrote:
>
>> Dear Natasha,
>>
>> I have had no problem downloading the respective ontologies. The  
>> main reason I contacted you yesterday is that every time I try to  
>> export the mappings into RDF, I get an 500 Internal Error message.  
>> Could this be caused by the number of correspondences available?
>>
>> Thank you very much for your help thus far.
>>
>> Kind regards,
>>
>> Quentin Reul
>>
>> On 11 Nov 2009, at 23:06, Natasha Noy wrote:
>>
>>> Dear Quentin,
>>>
>>> You should be able to download the ontologies themselves by  
>>> clicking on the ontology name -- that takes you to the page with  
>>> the download links. For the two ontologies that you listed, that  
>>> would be:
>>> http://bioportal.bioontology.org/ontologies/13352
>>> http://bioportal.bioontology.org/ontologies/13356
>>>
>>> For the mappings, go to
>>> http://bioportal.bioontology.org/mappings
>>> select the set of mappings that you need, by selecting the  
>>> ontologies, and then click on "Export".
>>>
>>> Hope this helps,
>>>
>>> Natasha
>>>
>>>
>>> On Nov 11, 2009, at 6:24 AM, Quentin Reul wrote:
>>>
>>>> Dear Sir/Madam,
>>>>
>>>> I'm a PhD student focusing on ontology mapping. I have looked at  
>>>> the website and I'm interested in several ontologies (e.g. Human  
>>>> Developmental Anatomy, Abstract and Timed) and their mappings.  
>>>> However, I'm unable to download the information from the website.
>>>>
>>>> Would you be able to advise on this problem?
>>>>
>>>> Kind regards,
>>>>
>>>> Quentin
>>>>
>>>> ============================
>>>> Quentin Reul
>>>> Researcher
>>>>
>>>> Vrije Universiteit Brussel
>>>> STARLab 10G730
>>>> Pleinlaan 2
>>>> 1050 Brussel
>>>> Tel: +32 (0)2 629 3487
>>>> Fax: +32 (0)2 629 3819
>>>> http://www.starlab.vub.ac.be
>>>>
>>>>
>>>>
>>>>
>>>>
>>>>
>>>> _______________________________________________
>>>> bioontology-support mailing list
>>>> bioontology-support at lists.stanford.edu
>>>> https://mailman.stanford.edu/mailman/listinfo/bioontology-support
>>>
>>
>>
>> ============================
>> Quentin Reul
>> Researcher
>>
>> Vrije Universiteit Brussel
>> STARLab 10G730
>> Pleinlaan 2
>> 1050 Brussel
>> Tel: +32 (0)2 629 3487
>> Fax: +32 (0)2 629 3819
>> http://www.starlab.vub.ac.be
>>
>>
>>
>>
>>
>>
>> _______________________________________________
>> bioontology-support mailing list
>> bioontology-support at lists.stanford.edu
>> https://mailman.stanford.edu/mailman/listinfo/bioontology-support
>
> Trish Whetzel, PhD
> Outreach Coordinator
> The National Center for Biomedical Ontology
> Ph: 650-721-2378
> whetzel at stanford.edu
> http://www.bioontology.org
>
>
>
> _______________________________________________
> bioontology-support mailing list
> bioontology-support at lists.stanford.edu
> https://mailman.stanford.edu/mailman/listinfo/bioontology-support

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