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juliadmtr at gmail.com
Sat Nov 21 09:10:27 PST 2009
Dear BioPortal community.
I would like to create mappings in different ontologies with LOOM.
Is it possible to use OBO or OWL format (in description is written,
that I have to use .pprj file format).
My second question is:
In the case of OBO ontology what will be the TargetSynonymSlotURI:
for example, what will be the TargetSynonymSlotURI in the following case:
date: 27:04:2009 14:30
auto-generated-by: OBO-Edit 1.101
name: sentrinization pathway
def: "A pathway of protein modification via conjugation with sentrin - a
family of ubiquitin-like protein. Sentrinization does not target proteins to
the proteasome, rather it targets proteins to particular cellular
compartments." [PubMed:PMID\: 10806345; 15808504 "Review articles in
related_synonym: "SUMO modification pathway" 
related_synonym: "sumoylation pathway" 
is_a: PW:0000433 ! protein modification pathway via conjugation with
ubiquitin and ubiqutin-like molecules
Is it pathway#related_synonym?
Thank you for your help,
with best regards,
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