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[bioontology-support] BioPortal web services

Junmin Liu junmin at pcbi.upenn.edu
Wed Apr 7 10:09:09 PDT 2010


Hi, Paul, Trish
Thanks for quick response.

How about this rest url:

http://rest.bioontology.org/bioportal/search/investigator/?ontologyids=1131&email=junmin@pcbi.upenn.edu?

It gives me display label as "microarray experimental conditions".

Thanks,

---junmin

On Wed, 7 Apr 2010, Paul R Alexander wrote:

> I'm also seeing the proper name 'MGED Ontology' in the web services (see 
> attached XML).
>
> Paul
> <http://5048wilder.dyndns.org:8112/>
>
> On 4/7/10 9:45 AM, Trish Whetzel wrote:
>> Hmm, that's odd. I see MGED Ontology. Did you clear your browser cache? WRT
>> to the Web service value, I can check on that after 11:00am today since I 
>> am
>> hosting a Webinar in a few minutes.
>> 
>> I've cc'd the support list in case someone has time to look into the Web
>> service response before me :-)
>> 
>> Trish
>> 
>> 
>> 
>>> -----Original Message-----
>>> From: Junmin Liu [mailto:junmin at pcbi.upenn.edu]
>>> Sent: Wednesday, April 07, 2010 9:41 AM
>>> To: Trish Whetzel
>>> Subject: RE: BioPortal web services
>>> 
>>> Hi, Trish
>>> It is still there:
>>> 
>>> http://bioportal.bioontology.org/ontologies/38801
>>> 
>>> It is still being called "microarray experimental conditions' in the web
>>> service.
>>> 
>>> --junmin
>>> 
>>> On Wed, 7 Apr 2010, Trish Whetzel wrote:
>>> 
>>> 
>>>> Hi Junmin,
>>>> 
>>>> Yes, I updated the name to MGED Ontology and wrote back, maybe the
>>>> 
>>> email was
>>> 
>>>> held up in posting? Were there other items to address?
>>>> 
>>>> Trish
>>>> 
>>>> 
>>>> 
>>>>> -----Original Message-----
>>>>> From: Junmin Liu [mailto:junmin at pcbi.upenn.edu]
>>>>> Sent: Wednesday, April 07, 2010 9:20 AM
>>>>> To: Trish Whetzel
>>>>> Subject: Re: BioPortal web services
>>>>> 
>>>>> Hi, Trish
>>>>> Did you get a chance to look at my email sent to your gmail account?
>>>>> It is regarding the MAGE ontology display label in bioportal.
>>>>> Thanks,
>>>>> --junmin
>>>>> 
>>>>> On Wed, 5 Aug 2009, Trish Whetzel wrote:
>>>>> 
>>>>> 
>>>>>> Hi Junmin,
>>>>>> 
>>>>>> 
>>>>>> 
>>>>>> I saw Chris at the ICBO conference and he mentioned that you were
>>>>>> 
>>>>> trying out
>>>>> 
>>>>>> the BioPortal REST services, I believe for Annotare. I am interested
>>>>>> 
>>>>> to know
>>>>> 
>>>>>> how use of the service is working for you and if you have any
>>>>>> 
>>> comments
>>> 
>>>>> or
>>>>> 
>>>>>> suggestions.
>>>>>> 
>>>>>> 
>>>>>> 
>>>>>> Trish
>>>>>> 
>>>>>> 
>>>>>> 
>>>>>> 
>>>>>> 
>>>>>> Trish Whetzel, PhD
>>>>>> 
>>>>>> Outreach Coordinator
>>>>>> 
>>>>>> The National Center for Biomedical Ontology
>>>>>> 
>>>>>> Ph: 650-721-2378
>>>>>> 
>>>>>> <mailto:whetzel at stanford.edu>  whetzel at stanford.edu
>>>>>> 
>>>>>> <http://www.bioontology.org/>  http://www.bioontology.org
>>>>>> 
>>>>>> 
>>>>>> 
>>>>>> 
>>>>>> 
>>>>>> 
>>>>>> 
>>>> 
>> _______________________________________________
>> bioontology-support mailing list
>> bioontology-support at lists.stanford.edu
>> https://mailman.stanford.edu/mailman/listinfo/bioontology-support
>>



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