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[bioontology-support] definition cross-references not shown

Hilmar Lapp hlapp at nescent.org
Mon Aug 23 18:00:53 PDT 2010


I assume so - I don't think the OLS added the xrefs themselves. I am  
not the maintainer of the ontology, so I can't tell you where that  
version of the ontology is that the OLS managed to obtain.

	-hilmar

On Aug 23, 2010, at 4:34 PM, Natasha F. Noy wrote:

> Hi Hilmar,
>
> I checked the OBO file for the Homology ontology, and those xrefs  
> are not in there. Is there a more complete file that we should be  
> loading instead?
>
> Thanks!
>
> Natasha
>
>
> On Aug 20, 2010, at 10:03 AM, Hilmar Lapp wrote:
>
>> The BioPortal doesn't seem to be showing definitional cross- 
>> references. For example, check out paralogy (or most any other term  
>> from the Homology Ontology - namespace HOM) at the OLS:
>>
>> http://www.ebi.ac.uk/ontology-lookup/?termId=HOM%3A0000011
>>
>> and at the Bioportal:
>>
>> http://bioportal.bioontology.org/visualize/42117/?conceptid=HOM%3A0000011
>>
>> The xrefs for definitions are extremely useful to check the origin  
>> for dubious or questionable term labels.
>>
>> 	-hilmar
>> -- 
>> ===========================================================
>> : Hilmar Lapp  -:- Durham, NC -:- informatics.nescent.org :
>> ===========================================================
>>
>>
>>
>> _______________________________________________
>> bioontology-support mailing list
>> bioontology-support at lists.stanford.edu
>> https://mailman.stanford.edu/mailman/listinfo/bioontology-support
>

-- 
===========================================================
: Hilmar Lapp  -:- Durham, NC -:- informatics.nescent.org :
===========================================================






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