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[bioontology-support] Feedback

Thomas, Paul pdthomas at
Fri Aug 27 11:35:03 PDT 2010

HI Natasha,

Thanks for the help!  I've looked at our original file, and it seems that the node now marked as "__deleted__" is the root of the ontology, which should be "owl:Thing".  Do you know what went wrong, and how it can be corrected?


On 8/26/10 2:52 PM, "Natasha F. Noy" <noy at> wrote:

Dear Paul,

I am not sure why your contact information wasn't there, but I've
added it. I have no problem visualizing your ontology in BioPortal
(see the attached screenshot), but there is indeed one top-level node
called "_deleted_". I looked at the OWL file, and such a resource is
defined there:

   <rdf:Description rdf:ID="__deleted__">
     <rdfs:comment rdf:datatype="
     >Xref: SOPHARM</rdfs:comment>

You can deleted it from the OWL file and submit a new version to
BioPortal. Or we can do it for you -- there will have to be a new
version though. We can then delete the current version if you would
like us to.


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