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[bioontology-support] lost ontologies

Paul R Alexander palexander at
Thu Dec 9 11:41:01 PST 2010


Does anything show up at the service?

http://example:8080/bioportal/ontologies should give you an XML list.


On 12/9/10 11:39 AM, Madani,Sina wrote:
> yesterday I had 3 ontologies with "parsing error" and one with 
> "explore" status. Today, my list was empty.
> Looking at the log shows this (repeated for all IDs)
> Error while getting latest version for ontology 1004
> java.lang.ClassCastException: 
> edu.stanford.smi.protegex.owl.model.impl.DefaultOWLNamedClass cannot 
> be cast to edu.stanford.smi.protege.model.Slot
> where should I look to figure out what went wrong? I stopped and 
> started all services and the instance. No change. The upload folder is 
> intact
> Thanks
> Sina
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