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[bioontology-support] XSD for hierarchy services...

Natasha Noy noy at stanford.edu
Sat Feb 20 22:20:48 PST 2010


Eamonn,

Thanks a lot! I've added it to the wiki page (http://www.bioontology.org/wiki/index.php/BioPortal_REST_services#XML_Schema_Definitions_for_the_REST_services 
)

If you have any updates, we'll be happy to post them and we'll try to  
maintain and update it as well if the format of the service results  
changes.

Thanks a lot again!

Natasha


On Feb 18, 2010, at 12:28 PM, Eamonn Maguire wrote:

> Hi all,
>
> So I've been working on the schema and other bioportal xml  
> processing stuff a bit today and I've attached an XSD which I think  
> works pretty well for the services described below at least...
>
> root concepts for an ontology: http://rest.bioontology.org/bioportal/concepts/40832/root
> term information: http://rest.bioontology.org/bioportal/concepts/40832/snap:IndependentContinuant
> children/parents of a node: http://rest.bioontology.org/bioportal/concepts/parents/40832/snap:Continuant?level=1
>
> and anything with the following xml structure:
>
> <success xmlns="http://bioontology.org/bioportal/classBeanSchema#">
>   <accessedResource>/bioportal/concepts/40832/root</accessedResource>
>   <accessDate>2010-02-18 11:33:38.731 PST</accessDate>
>   <data>
>     <classBean/>
>     <list/>
>   </data>
> </success>
>
> I have code which inserts the name space into the xml file returned  
> from the webservice as well, but it would obviously be good if you  
> guys could do this automatically.
>
> I will create XSD for the other services as soon as I can, but this  
> was my priority today. I will probably generalise this schema more  
> if I find that some results don't process properly, but i've put it  
> through a lot of files and it has worked well so far!
>
> <xsd_schema_classBean.xsd>
>
> 	
>
>
>
> Eamonn Maguire
> Software Engineer - NET Project
> http://www.ebi.ac.uk/~maguire
> http://ebiinterfaces.wordpress.com/
>
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