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[bioontology-support] http://bioportal.bioontology.org/ontologies/40261

Alan Ruttenberg alanruttenberg at gmail.com
Tue Jul 20 11:55:40 PDT 2010


On Mon, Jul 19, 2010 at 8:26 PM, Trish Whetzel <whetzel at stanford.edu> wrote:
> Hi Alan,
>
> Yes, the bulk of this ontology is instances and instances are not currently
> displayed via the Web interface.  However, instances are accessible via the
> Web services.  For example:
> http://rest.bioontology.org/bioportal/concepts/instances/40261?conceptid=CellLine&pagesize=1&pagenum=1&email=example@example.org
> as documented here:
> http://www.bioontology.org/wiki/index.php/NCBO_REST_services#Instance_Services
>
> We are collecting requirements for the display of instances in the Web
> interface if you or someone you know would like to comment. I plan to
> discuss this further with Melissa Haendel tomorrow.

You want to show the types of the instances, and the annotations. I'd
suggest that the instances be available in the same hierarchy as the
classes - so below a class you can see both subclasses and direct or
inferred instances.

-Alan


>
> Trish
>
>
>
> On Jul 13, 2010, at 10:22 AM, Alan Ruttenberg wrote:
>
>> Virtually none of the content is displayed for this ontology, presumably
>> because the bulk of it is instances.
>> _______________________________________________
>> bioontology-support mailing list
>> bioontology-support at lists.stanford.edu
>> https://mailman.stanford.edu/mailman/listinfo/bioontology-support
>
>



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