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[bioontology-support] http://bioportal.bioontology.org/ontologies/40261

Alan Ruttenberg alanruttenberg at gmail.com
Tue Jul 20 12:41:26 PDT 2010


On Tue, Jul 20, 2010 at 3:14 PM, Trish Whetzel <whetzel at stanford.edu> wrote:
>>> Yes, the bulk of this ontology is instances and instances are not
>>> currently
>>> displayed via the Web interface.  However, instances are accessible via
>>> the
>>> Web services.  For example:
>>>
>>> http://rest.bioontology.org/bioportal/concepts/instances/40261?conceptid=CellLine&pagesize=1&pagenum=1&email=example@example.org
>>> as documented here:
>>>
>>> http://www.bioontology.org/wiki/index.php/NCBO_REST_services#Instance_Services
>>>
>>> We are collecting requirements for the display of instances in the Web
>>> interface if you or someone you know would like to comment. I plan to
>>> discuss this further with Melissa Haendel tomorrow.
>>
>> You want to show the types of the instances, and the annotations. I'd
>> suggest that the instances be available in the same hierarchy as the
>> classes - so below a class you can see both subclasses and direct or
>> inferred instances.
>
>
> Do you mean display the instances in the tree hierarchy, e.g. the left-hand
> column displayed at: http://bioportal.bioontology.org/visualize/44099?

Yes.


>
> Trish
>
>
>



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