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[bioontology-support] HPO loading

Trish Whetzel whetzel at
Wed Jun 9 19:00:01 PDT 2010

Attached is the metadata file. Please review for accuracy of data for  
HPO and then commit to SVN and let us know the full path to the file.


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On Jun 8, 2010, at 8:20 AM, Trish Whetzel wrote:

> Hi Sebastian,
> Versions of HPO listed as "Archived, not available to explore" were  
> loaded fine. To manage space on the database, we periodically run a  
> script to archive versions.
> I see that HPO is now in a SVN repository ( 
> ). We can set-up the automatic pull to point to that location in the  
> future. I'll send a metadata file that you can commit to your SVN  
> repository and then just let us know the URL where the file is  
> located and we can test out the pull process.
> Thanks,
> Trish
> On Jun 8, 2010, at 6:10 AM, Sebastian K?hler wrote:
>> Hi Trish,
>> just wanted to check some issues. Some versions of the HPO are  
>> listed as "Archived, not available to explore". Is that ok or does  
>> that mean anything went wrong with importing the HPO?
>> Secondly, the last version from 06/07/2010 is listed as "See Remote  
>> Site". There seems to be some kind of error...  !?
>> Thanks in advance,
>> Sebastian
>>> Just wanted to check back to see that the loading of HPO is going  
>>> smoothly. Based on the view of BioPortal it seems to be ok, have  
>>> you noticed any issues?
>> --
>> Sebastian K?hler, M.Sc. bioinformatics
>> Institut f?r Medizinische Genetik
>> Universit?tsklinikum Charit?
>> Augustenburger Platz 1
>> 13353 Berlin
>> Germany
>> voice: 49-30-450569135
>> email: sebastian.koehler at
>> web:
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> bioontology-support at

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