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[bioontology-support] Mesh Ontology Annotation Produces no results

Trish Whetzel whetzel at stanford.edu
Fri Mar 26 10:09:11 PDT 2010


Dear Marina,

We encountered a data quality issue with MeSH and are currently re- 
populating this information in order to have it accessible by the  
Annotator early next week. Apologies for the inconvenience.

Trish


On Mar 26, 2010, at 8:21 AM, Marin, Marina wrote:

> Hi Trish,
>
> I was wondering if there is any update on the question below.
>
> Thanks.
>
> Marina Marin
> Senior Applications Programmer
> Division of Educational Informatics
> New York University School of Medicine
> 550 First Avenue, Coles 202
> New York, NY 10016
> Tel: (212) 263-2058
>
>
> On 3/19/10 11:26 AM, "Trish Whetzel" <whetzel at stanford.edu> wrote:
>
> Can you send a list of parameters that your application uses to  
> access the Annotator Web Service, e.g. longestOnly, stopWords, etc.  
> as well as a small example of sample text?
>
> Best regards,
> Trish
>
>
> On Mar 19, 2010, at 8:18 AM, Marin, Marina wrote:
>
> Dear Sir or Madame,
>
> We, at NYU Medical Center have just deployed an application that  
> uses NCBO Annotator Web Service to generate MeSH terms from a  
> medical course goals and objectives.
> The tool worked great until very recently, when, the Mesh ontology  
> (42142, former 40401) would not produce any results using either http://bioportal.bioontology.org/annotator 
>  or http://rest.bioontology.org/test_oba.html
> Please, advise.
>
> Thank you.
>
> Marina Marin
> Senior Applications Programmer
> Division of Educational Informatics
> New York University School of Medicine
> 550 First Avenue, Coles 202
> New York, NY 10016
> Tel: (212) 263-2058
>
>
>
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>
> Trish Whetzel, PhD
> Outreach Coordinator
> The National Center for Biomedical Ontology
> Ph: 650-721-2378
> whetzel at stanford.edu
> http://www.bioontology.org
>
>
>
>
>
>
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> please notify the sender by return email and delete the original  
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