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[bioontology-support] REST term services if concept id is a uri

Tomasz Adamusiak tomasz at ebi.ac.uk
Mon May 10 03:26:02 PDT 2010


Hi Paul,

To follow up on this. This does not seem to be working for hierarchy 
services (examples below). Is there some other way?

http://rest.bioontology.org/bioportal/virtual/parents/1084/?conceptid=http%3a%2f%2fontology.neuinfo.org%2fNIF%2fBiomaterialEntities%2fNIF-Molecule.owl%23nifext_5168 


http://rest.bioontology.org/bioportal/virtual/rootpath/1084/?conceptid=http%3a%2f%2fontology.neuinfo.org%2fNIF%2fBiomaterialEntities%2fNIF-Molecule.owl%23nifext_5168 


Thanks
Tomasz

On 07/05/2010 17:30, Paul R Alexander wrote:
> Tomasz,
>
> Concept IDs that are URLs need to be passed via a query string parameter
> and be URL-encoded, so the proper format would be:
> http://rest.bioontology.org/bioportal/virtual/ontology/1084/?conceptid=http%3a%2f%2fontology.neuinfo.org%2fNIF%2fBiomaterialEntities%2fNIF-Molecule.owl%23nifext_5168
>
>
> Thanks,
> Paul Alexander
> Web / UI Developer
> NCBO BioPortal
>
> On 5/7/10 7:52 AM, Tomasz Adamusiak wrote:
>> Hi,
>>
>> I can't figure a way to use term services for terms that have uri as
>> concepts IDs, e.g. NIFSTD lipoxin A4 which is visible on the web GUI:
>>
>> http://bioportal.bioontology.org/visualize/42622/?conceptid=http://ontology.neuinfo.org/NIF/BiomaterialEntities/NIF-Molecule.owl%23nifext_5168
>>
>>
>> But not accessible through REST API:
>> http://rest.bioontology.org/bioportal/virtual/ontology/1084/http://ontology.neuinfo.org/NIF/BiomaterialEntities/NIF-Molecule.owl#nifext_5168
>>
>>
>> URL encoded doesn't work either:
>> http://rest.bioontology.org/bioportal/virtual/ontology/1084/http%3a%2f%2fontology.neuinfo.org%2fNIF%2fBiomaterialEntities%2fNIF-Molecule.owl%23nifext_5168
>>
>>
>> Thanks for looking into it.
>>
>> Cheers
>> Tomasz
>>
>>
>>



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