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[bioontology-support] Feedback

Trish Whetzel whetzel at stanford.edu
Mon May 17 14:03:15 PDT 2010


Hi Sina,

We are loading the NCI Metathesaurus to a development version of  
BioPortal for testing.

Trish


On May 10, 2010, at 3:04 PM, Madani,Sina wrote:

> Yes
>
> http://protegewiki.stanford.edu/wiki/BioPortal_Reference_Plugin
>
>
>
> From: Trish Whetzel [mailto:whetzel at stanford.edu]
> Sent: Monday, May 10, 2010 4:59 PM
> To: Madani,Sina
> Cc: support
> Subject: Re: [bioontology-support] Feedback
>
> Is the widget the BioPortal reference plugin (http://protegewiki.stanford.edu/wiki/BioPortal_Reference_Plugin)?
>
> Trish
>
>
> On May 10, 2010, at 2:57 PM, Madani,Sina wrote:
>
>
> I am not using any specific application just Bioportal widget in  
> Protégé 3.4.4 for doing association between my classes and some  
> external reference terminologies especially NCI Meta.
> Thank you for the follow up
> Sina
>
> From: Trish Whetzel [mailto:whetzel at stanford.edu]
> Sent: Monday, May 10, 2010 4:54 PM
> To: Madani,Sina
> Cc: support
> Subject: Re: [bioontology-support] Feedback
>
> Hi Sina,
>
> Although we can load the NCI Metathesaurus, I was notified that the  
> Metathesaurus does not have a hierarchy and will not be able to be  
> visualized in BioPortal. Will this be a problem for your application?
>
> Trish
>
>
> On May 10, 2010, at 9:33 AM, Trish Whetzel wrote:
>
>
>
> Hi Sina,
>
> I have put in a request to have the NCI Metathesaurus loaded into  
> BioPortal.
>
> Thanks,
> Trish
>
>
> On May 10, 2010, at 7:08 AM, admin at bioontology.org wrote:
>
>
>
> Name : Sina Madani
>
> Email : ahmadani at mdanderson.org
>
> Comment:
> Is there any plan for adding NCI Metatheses to the ontologies as  
> well? Currently only NCI Thesaurus is listed and I noticed the  
> difference when I used Bioportal for searching "ideal body weight".  
> This term only exist in NCI Meta thesaurus and not NCI Thesaurus.
>
> Thank you
> Sina
> _______________________________________________
> bioontology-support mailing list
> bioontology-support at lists.stanford.edu
> https://mailman.stanford.edu/mailman/listinfo/bioontology-support
>
> Trish Whetzel, PhD
> Outreach Coordinator
> The National Center for Biomedical Ontology
> Ph: 650-721-2378
> whetzel at stanford.edu
> http://www.bioontology.org
>
>
>
> _______________________________________________
> bioontology-support mailing list
> bioontology-support at lists.stanford.edu
> https://mailman.stanford.edu/mailman/listinfo/bioontology-support
>
>

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