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[bioontology-support] inconsistent issues between BioPortal and MeSH

Nigam Shah nigam at stanford.edu
Fri Oct 15 18:58:05 PDT 2010


Hi Eugene,

UMLS has the relations exactly the same way we have them. See attached
screen shot from UMLSKS as of tonight. Where is the screenshot you provided
from? Natasha and I will discuss this further Monday, but right now, we show
exactly what the UMLSKS is showing.

--Nigam.

On Fri, Oct 15, 2010 at 11:44 AM, Eugene <eugene at nextbio.com> wrote:

>  Dear Sir or Madam,
>
>
>
> Yesterday I have posted an inconsistency issue. Today we just found another
> similar issue described in the following after we download the ontology from
> BioPortal. There is inconsistency between BioPortal and official MeSH and
> UMLS portal.
>
>
>
> In the following, those circled terms are diseases, but they are put under
> Technique/Procedure ontology.
>
>
>
>
>
>
>
> I have checked MeSH and UMLS portals. The actual children of “Nepolasms,
> Experimental” is shown in the following:
>
>
>
>
>
> Could you evaluate and fix if that’s a bug?
>
>
>
> Please let us know what you want to do for this issue and yesterday’s (I
> posted similar issue yesterday).
>
>
>
> Thanks
>
>
>
> Eugene
>
>
>
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