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[bioontology-support] Fwd: contact information about the "Submit a term" functionality in bioportal

Trish Whetzel Whetzel at stanford.edu
Wed Oct 20 18:48:42 PDT 2010


FWD'ing to support to close out the thread.

Trish


Begin forwarded message:

> From: Paul R Alexander <palexander at stanford.edu>
> Date: October 19, 2010 10:39:07 AM PDT
> To: rboden <rboden at rsna.org>, Daniel Rubin <dlrubin at stanford.edu>, Trish Whetzel <Whetzel at stanford.edu>
> Subject: Re: contact information about the "Submit a term" functionality in bioportal
> 
> On 10/6/10 9:02 AM, rboden wrote:
>> 
>> thank you, this seems to work now.
>> 
>> I see my test entry when I go to: http://stagerest.bioontology.org/bioportal/notes/44303
> The entries you were making directly against the REST service were using the short id instead of the fullId for the Class/term, which the UI uses in order to look up notes on a given class.
> 
> If you look at the REST response for our term service on RID0, you'll see the two ids I'm talking about (the fullId will always be a URI):
> http://stagerest.bioontology.org/bioportal/concepts/44303?conceptid=RID0#notes
> 
> So, you're rightly expecting notes that you submitted using the class id RID0 to appear here:
> http://stage.bioontology.org/visualize/44303?conceptid=RID0#notes
> 
> Unfortunately, we don't currently validate the ids that are provided because we've had requests to be able to submit notes on proposed terms, which of course wouldn't have ids that we could validate yet. We'll have to consider a solution here to handle this situation. However, if you switch to using the fullId then everything should work well.
> 
> Let me know if you have any questions.
> 
> Paul R Alexander
> Web / UI Developer
> NCBO BioPortal
> Stanford Center for Biomedical Informatics Research
> 
> 
> 

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