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[bioontology-support] Ontology View

Trish Whetzel whetzel at stanford.edu
Tue Sep 28 18:14:33 PDT 2010


Thanks for the background information. The new version is now loaded:
http://bioportal.bioontology.org/visualize/43057

Trish 


On Sep 22, 2010, at 11:51 AM, Bhandare, Aniket wrote:

> Trish,
> 
> That's interesting. I tried to reproduce this issue and here are the
> steps -
> 
> 1. I use IE 7.0
> 2. I opened a new tab in IE.
> 3. I posted link mentioned by you
> http://rest.bioontology.org/bioportal/viewextractor/42789/?conceptid=372
> 148003&ontologyname=http://testing.org/ethnic-group.owl&delay=10 in that
> tab
> 4. Then it gave me a pop-up with options "Find" and "Save".
> 5. (Here is the step which caused this problem. I don't know why though)
> I clicked on "Find" by mistake. It gave me Windows page for unknown
> FileType.
> 6. Now I posted the same link again in the same tab and saved the file.
> It generated incomplete file.
> 
> I was not able to reproduce this issue consistently. But I guess if I
> open new browser window and save file in first place it is not
> truncated. I have attached the newly generated file. Can you please use
> this to correct my view? Please let me know if any other steps need to
> be performed by me.
> 
> Thanks,
> -Aniket
> 
> 
> -----Original Message-----
> From: Trish Whetzel [mailto:whetzel at stanford.edu] 
> Sent: Wednesday, September 22, 2010 1:21 AM
> To: Bhandare, Aniket
> Cc: Nigam Shah; support
> Subject: Re: Ontology View
> 
> Hi Aniket,
> 
> I noticed that there is an error in displaying the "Ethnic group" view  
> of SNOMEDCT you uploaded. In reviewing the OWL file I see that the  
> file is truncated and ends with:
>  <!-- http://testing.org/ethnic-group.owl#47250000 -->
> 
>     <owl:Class rdf:about="http://testing.org/ethnic- 
> group.owl#47250000">
>         <rdfs:label>Bruneians</rdfs:label>
>         <rdfs:subClassOf
> rdf:resource="http://testing.org/ethnic-group.owl#24812003 
> "/>
>         <SuperClass>Mongoloid (Id: 24812003)</SuperClass>
>         <SYNONYM_FN>Bruneians (ethnic group)</SYNONYM_FN>
>         <TUI>T098</TUI>
>         <UMLS_CUI>C0337896</UMLS_CUI>
>         <CTV3ID>XUElo</CTV3ID>
> 
> 
> Can you send me the steps you used to create the OWL file in order to  
> troubleshoot why the OWL file is truncated?
> 
> 
> Thanks,
> Trish
> 
> 
> 
> <http___testing.org_ethnic-group.owl>




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