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[bioontology-support] mapping service

Madani,Sina AHMadani at mdanderson.org
Tue Apr 5 12:20:55 PDT 2011


Thanks for the fast response!

Is your new comprehensive mapping solution based on the new LexEVS 6.0/6.1 or is it something specific to your appliance? Do you have any plan for upgrading the appliance with the new version of LexEVS?
I think the new LexEVS provides inter-terminology mapping services as well.


Sina

From: Paul R Alexander [mailto:palexander at stanford.edu]
Sent: Tuesday, April 05, 2011 2:09 PM
To: Madani,Sina
Cc: support at bioontology.org Support; Lari,Bryan
Subject: Re: mapping service

Sina,

On your version of the NCBO Appliance there is a prototype mapping service, but it isn't great when dealing with a large number of mappings. See the documentation [1] for examples, and you can replace bioportal.bioontology.org with your machine's domain. We've recently implemented a more comprehensive mapping solution but it hasn't been integrated with the Appliance.

Mapping data is stored in the bioportal_ui database in a table called 'mappings'. The column definitions are pretty obvious if you take a look.

Paul

[1] http://www.bioontology.org/wiki/index.php/NCBO_REST_services#Mapping_Service

On 4/5/11 12:02 PM, Madani,Sina wrote:
Hi Paul,
I have another quick question for you :)  Do you know which table stores the mapping that user can define in UI for a specific term between two terminologies like the one shown below?
Is this mapping accessible through service calls?

Thanks as always for your great help

Sina

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