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[bioontology-support] HAO ontology loading

Trish Whetzel whetzel at stanford.edu
Fri Jun 3 20:27:24 PDT 2011


Hi Jim, 

To re-pull the OWL version, please update the metadata. The upcoming fix to the automatic ontology loading process should prevent this error from re-occurring. 

Trish 

On Jun 3, 2011, at 5:43 PM, "Ray Fergerson" <ray.fergerson at stanford.edu> wrote:

> Sorry for the delay in getting back to you. Yes we did (do) have an
> overwrite problem on OBO ontologies that are updated through BioPortal. We
> have temporarily turned off the automatic loading entirely to deal with
> this problem. We hope to get a patch out soon (end of next week) that
> addresses this problem.
> 
> Ray
> 
>> -----Original Message-----
>> From: bioontology-support-bounces at lists.stanford.edu
>> [mailto:bioontology-support-bounces at lists.stanford.edu] On Behalf Of
>> Jim Balhoff
>> Sent: Thursday, May 19, 2011 10:26 AM
>> To: bioontology-support at lists.stanford.edu
>> Subject: [bioontology-support] HAO ontology loading
>> 
>> Hi,
>> 
>> We're having some trouble getting the correct file loaded into
>> Bioportal for HAO (Hymenoptera anatomy). Several weeks ago we requested
>> a switch from our old OBO file to a new OWL format. This worked fine
>> for a while, but last week it unexpectedly switched back to OBO format.
>> We logged in to Bioportal and edited the metadata to point to the right
>> location (http://purl.obolibrary.org/obo/hao.owl), but yesterday
>> Bioportal retrieved the OBO version again. How can we fix this?
>> 
>> Thank you,
>> Jim Balhoff
>> 
>> ____________________________________________
>> James P. Balhoff, Ph.D.
>> National Evolutionary Synthesis Center
>> 2024 West Main St., Suite A200
>> Durham, NC 27705
>> USA
>> 
>> 
>> 
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