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[bioontology-support] error?

Trish Whetzel whetzel at stanford.edu
Fri Jun 17 17:08:40 PDT 2011


What browser and version are you using? I'm not able to reproduce the issue with the link: http://bioportal.bioontology.org/ontologies?filter=PSI with Mac/Firefox. 

Also, the issue from yesterday regarding expanding the child terms through the Web interface is now resolved.

Trish 


On Jun 16, 2011, at 10:22 PM, Eric Deutsch wrote:

> Hi Trish, I can’t even get any terms to show up starting from:
>  
> http://bioportal.bioontology.org/ontologies?filter=PSI
>  
> It’s not a huge deal, but I kind of like the interface, but there’s always OLS. I was also having trouble with OBO-Edit. I was just thinking of linking into BioPortal from the mzML and TraML development pages, but I’ll wait until it’s working. No rush, really, I’m on vacation next week.
>  
> Cheers,
> Eric
>  
>  
> From: Trish Whetzel [mailto:whetzel at stanford.edu] 
> Sent: Thursday, June 16, 2011 12:13 PM
> To: Eric Deutsch
> Cc: Eric Deutsch; support at bioontology.org Support
> Subject: Re: error?
>  
> Hi Eric, 
>  
> The top-level of the Mass Spectrometry ontology can now be visualized, but there are child terms that can not be expanded to visualize within the Web interface. I have reported this error for the developers to investigate further. The child terms are available via the Web services [1], e.g. http://rest.bioontology.org/bioportal/virtual/leafpath/1105/MS:1000881
>  
> Can you provide information on how critical this error is to your project to prioritize this item, e.g. is this a complete blocker to your work? 
>  
> Trish 
>  
> [1] http://www.bioontology.org/wiki/index.php/NCBO_REST_services#Get_paths_to_root.2Fleaves_from_a_concept_in_the_latest_version_of_a_given_ontology  
>  
>  
> On Jun 16, 2011, at 8:25 AM, Eric Deutsch wrote:
> 
> 
> Hi Trish, I suppose you know about this, but in case not..
>  
> <image001.png>
>  
> The “issue” appears two days old now?
>  
>  

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