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[bioontology-support] error in NCBO rest service
Brig Mecham
brig.mecham at gmail.com
Thu Jun 23 14:55:52 PDT 2011
Hello,
I'm trying to use your rest API services to download the path from the
concept id fma:Anatomical_structure to all of its leaves. I use the
following command.
http://rest.bioontology.org/bioportal/virtual/leafpath/1053/fma:Anatomical_structure?apikey=2fa8f36b-0ea9-4000-8da8-117d63102067
This call results in a file with 5,008 rows, the last of which
corresponds to the concept:
fma:Autosome.fma:Chromosome.fma:Cell_component.fma:Cardinal_cell_part
The problem is there are many more leaves that are beneath
fma:Anatomical_structure. I figured there was a limit variable that
needed to be passed via the URL and found a description of this here:
Unfortunately, adding the limit variable as shown below does not
download more (or less when I set it to something like 5) terms.
http://rest.bioontology.org/bioportal/virtual/leafpath/1053/fma:Anatomical_structure?apikey=2fa8f36b-0ea9-4000-8da8-117d63102067&limit=50000
Am I missing something or does this call not work properly?
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