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[bioontology-support] Coriell Cell Line

James Malone malone at ebi.ac.uk
Mon Mar 7 10:28:00 PST 2011


Hi Trish,

yes - it's a big ontology, >28,000 classes.

Thanks for your work on this.

James


> Thanks, also I see in Protege that there is a branch with ~2800 sibling
> terms. Is that the intended hierarchy?
>
> Trish
>
>
> On Mar 5, 2011, at 1:00 AM, James Malone wrote:
>
>> Hi Trish,
>>
>> Ah interesting. Actually everytime I tried to "submit" I got a sorry we
>> have an encountered an error page, so I assumed it had not be uploaded
>> hence the mutliple uploads. You're right in that they are the same thing
>> so please feel to remove all but one copies. Not sure if this is an
>> issue
>> but the Coriell is quite big - about 70MB. It loads in Protege ok,
>> though
>> takes a little while.
>>
>> Cheers,
>>
>> James
>>
>>
>>
>>> Hi James,
>>>
>>> I saw the upload of the Coriell Cell Line ontology and noticed there
>>> are a
>>> few problems. One is that there are multiple uploads of the ontology as
>>> separate entries on the Browse page. Was the ontology file uploaded the
>>> same file in all cases and if so, can the other entries be removed
>>> therefore leaving only one entry on the Browse page? Were the separate
>>> entries on the Browse page the result of separate ontology submissions?
>>>
>>> Also, although the Explore link is displayed there is an error in
>>> visualizing the ontology. We are looking into this.
>>>
>>> Trish
>>>
>>>
>>>
>>
>>
>> --
>> European Bioinformatics Institute,
>> Wellcome Trust Genome Campus,
>> Hinxton,
>> Cambridge, CB10 1SD,
>> United Kingdom
>> Tel: + 44 (0) 1223 494 676
>> Fax: + 44 (0) 1223 492 468
>>
>
>


-- 
European Bioinformatics Institute,
Wellcome Trust Genome Campus,
Hinxton,
Cambridge, CB10 1SD,
United Kingdom
Tel: + 44 (0) 1223 494 676
Fax: + 44 (0) 1223 492 468




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