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[bioontology-support] Annotator REST API issues

Trish Whetzel whetzel at stanford.edu
Thu Mar 24 13:37:27 PDT 2011


These issues were submitted to the tracker for the developers to investigate further.

Trish  


On Mar 15, 2011, at 11:39 AM, Joey Geiger wrote:

> Per request, here are the error messages that I'm getting when I use the Annotator.
> 
> This is for when the system returns HTML to an XML request.
> 
> ncbo_service.rb:37: #<REXML::ParseException: Missing end tag for 'hr' (got "body")
> Line: 12
> Position: 493
> Last 80 unconsumed characters:
>> -- Missing end tag for 'hr' (got "body")
> Line: 12
> Position: 493
> Last 80 unconsumed characters:
> 
> 
> This is the hibernate query issue error.
> 
> gminer_processor.rb:95: FAILURE!!!! worker:414e5688-fc3b-4255-86bf-0a113b69e145 job:223 geo:GSM6447 field:source_name Exception:#<NCBOException: Internal Server Error (could not execute query; nested exception is org.hibernate.exception.JDBCConnectionException: could not execute query)>
> 
> 
> 
> 
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