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[bioontology-support] [BioPortal] Feedback from Barry Smith

Trish Whetzel whetzel at stanford.edu
Fri Apr 20 15:22:38 PDT 2012


To round out this thread, in the midst of triaging this item I specified the property used by FMA for the definition and re-calculated the metrics. This decreased the number of terms without a definition to 82134.

Trish 


On Mar 27, 2012, at 1:28 PM, Ray Fergerson wrote:

> Barry,
> 
> There are indeed many terms with definitions but there are many terms
> without as well. Just poking around, the upper level nodes in the
> anatomical entity branch seem to have definitions while the deeper ones do
> not. Other top-level branches have no definitions at all. The metrics
> currently report roughly 1150 terms with definitions. It is not obvious to
> me that this number is wrong.
> 
> Ray
> 
>> -----Original Message-----
>> From: bioontology-support-bounces at lists.stanford.edu
>> [mailto:bioontology-support-bounces at lists.stanford.edu] On Behalf Of
>> support at bioontology.org
>> Sent: Friday, March 23, 2012 9:46 PM
>> To: support at bioontology.org; phismith at buffalo.edu
>> Subject: [bioontology-support] [BioPortal] Feedback from Barry Smith
>> 
>> 
>> Name: Barry Smith
>> 
>> Email: phismith at buffalo.edu
>> 
>> Location: http://bioportal.bioontology.org/ontologies/44507?p=terms
>> 
>> Comment:
>> 
>> Your metadata lists the number of classes in the FMA as 83281, and
>> lists the number of classes without definitions as 82381
>> 
>> http://bioportal.bioontology.org/ontologies/1053
>> 
>> But there are many terms with definitions in the FMA.
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Trish Whetzel, PhD
Outreach Coordinator
The National Center for Biomedical Ontology
Ph: 650-721-2378
http://www.bioontology.org

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