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[bioontology-support] Ontology 1581

White, Pamela Pamela.White.1 at
Wed Aug 15 08:52:06 PDT 2012

Thank you Paul and Ketty.  That was really helpful.

I may, indeed have other questions.  Thank you for the offer.

Best wishes,

From: Paul R Alexander [palexander at]
Sent: 15 August 2012 02:04
To: Mobed, Ketty
Cc: White, Pamela; support at
Subject: Re: [bioontology-support] Ontology 1581


Ketty is correct, you would need to use something that supports OWL files if you are clicking on the "Ontology" link under "Downloads". Otherwise, you can click on the menu where it says "Summary" and select "Terms" from the list to see the full ontology.

You can also see the terms here:

Let me know if you have any other questions.

Paul R Alexander
Senior Software Engineer
NCBO BioPortal
Stanford Center for Biomedical Informatics Research

On 8/14/12 9:17 AM, Mobed, Ketty wrote:
Hi Pam,

thanks for your interest in the Health Indicator Ontology (ID 1581). I am forwarding your issue to the BioPortal support staff. Generally you need an owl reader application to view the downloaded owl file. I use Protege (more information here ).

Quick question, can you access and see the expanded ontology in BioPortal?


'It's the little things that matter'

Ketty Mobed, PhD
UCSF-IHPS-Informatics Lab
ketty.mobed at<mailto:ketty.mobed at>
From: White, Pamela [Pamela.White.1 at<mailto:Pamela.White.1 at>]
Sent: Tuesday, August 14, 2012 3:22 AM
To: Mobed, Ketty
Subject: Ontology 1581

Dear Ketty,

I would like to access your ontology, referenced at:

I am having trouble accessing it with my Microsoft Browser, however.  The error message is that the format is unrecognised.  I notice the format is OWL.  Is there anything I need to do to view it in the OWL format?

Kind regards,

Pam White, MLS, PhD student
Centre for Health Informatics, City University London
pamela.white.1 at<mailto:pamela.white.1 at>

bioontology-support mailing list
bioontology-support at<mailto:bioontology-support at>

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