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[bioontology-support] [BioPortal] Feedback from David Carral

David Carral dcarralma at gmail.com
Sun Dec 23 07:46:32 PST 2012


Thanks a lot for the help!

On Wed, Dec 19, 2012 at 11:17 AM, Trish Whetzel <whetzel at stanford.edu> wrote:
> Hi David,
>
> One way to download the ontology files is to write a script that uses the
> NCBO Web services, "List latest ontologies" [1] and "Download latest
> ontology file" [2]. Therefore you can get a list of all ontologies in
> BioPortal and then loop through the list to download the latest ontology
> file.
>
> Trish
>
>
> [1]
> http://www.bioontology.org/wiki/index.php/NCBO_REST_services#List_all_the_latest_version_of_ontologies
> [2]
> http://www.bioontology.org/wiki/index.php/BioPortal_REST_services#Download_the_latest_ontology_file
>
>
> Trish Whetzel, PhD
> Outreach Coordinator
> The National Center for Biomedical Ontology
> Ph: 650-721-2378
> http://www.bioontology.org
>
> "Like" NCBO on Facebook: http://on.fb.me/bioontology
>
> Follow NCBO on Twitter: http://twitter.com/#!/bioontology
>
> Join in Discussions on LinkedIn: http://linkd.in/ncbo-group
>
>
>
> On Dec 19, 2012, at 5:56 AM, support at bioontology.org wrote:
>
>
> Name: David Carral
>
> Email: dcarralma at gmail.com
>
> Location: http://bioportal.bioontology.org/ontologies
>
> Comment:
> Hi, I am a PhD student from Wright State University at US and I am currently
> doing some work with highly expressible ontologies. I would like to download
> all the (public) ontologies available in your webpage and use them in my
> experiments. Is there any easy way of doing this? Any repository where I can
> just download them all directly without going one by one?
>
> It goes without saying that in case of achieving any publication I would
> cite and recommend your repository.
>
> Kind regards and thanks,
> David
>
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> bioontology-support at lists.stanford.edu
> https://mailman.stanford.edu/mailman/listinfo/bioontology-support
>
>
>


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