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[bioontology-support] How to submit labels with numbers and alpha characters

Trish Whetzel whetzel at stanford.edu
Tue Jan 3 15:55:17 PST 2012


Hi Zack,

I'll check with the Protege folks about this since BioPortal is displaying the values the same as in Protege 3.4.7.  

Trish 
 


On Dec 16, 2011, at 10:46 AM, Zachariah Schmidt wrote:

> Hi, 
> I am trying to submit a test ontology created in current release of P4
> (RDF/XML). The ontology successfully uploaded and is viewable on the staging
> server at:   http://stagepurl.bioontology.org/ontology/ETMF
> http://stagepurl.bioontology.org/ontology/ETMF .
> 
> I would like the BioPortal 'preferred names' to look as follows, where each
> label has a number, space char, then alpha char, and an optional '.' char:
> 
> 100 A
> 200 A
> 
> Also my ID should not contain any underline character and should look
> something like:  
> ETMF001
> or 
> ETMF-001
> 
> or similar format without underline char.
> 
> However, when a label is created in BioPortal with a number and an alpha
> char it contains curly braces surrounding the label and the ID:  {etmf_001,
> '100 A'}
> 
> http://ncbo-support.2288202.n4.nabble.com/file/n4205127/label.jpg 
> 
> Again, my main objective is to get a number and an alpha char to show up in
> the BP Preferred Name without the curly braces and the ID...Thank you in
> advance for your help.
> 
> 
> 
> 
> -----
> Zachariah Schmidt
> SterlingBio
> --
> View this message in context: http://ncbo-support.2288202.n4.nabble.com/How-to-submit-labels-with-numbers-and-alpha-characters-tp4205127p4205127.html
> Sent from the NCBO Support mailing list archive at Nabble.com.
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