Search Mailing List Archives

Limit search to: Subject & Body Subject Author
Sort by: Reverse Sort
Limit to: All This Week Last Week This Month Last Month
Select Date Range     through    

[bioontology-support] How to submit labels with numbers and alpha characters

Trish Whetzel whetzel at
Tue Jan 3 15:55:17 PST 2012

Hi Zack,

I'll check with the Protege folks about this since BioPortal is displaying the values the same as in Protege 3.4.7.  


On Dec 16, 2011, at 10:46 AM, Zachariah Schmidt wrote:

> Hi, 
> I am trying to submit a test ontology created in current release of P4
> (RDF/XML). The ontology successfully uploaded and is viewable on the staging
> server at:
> .
> I would like the BioPortal 'preferred names' to look as follows, where each
> label has a number, space char, then alpha char, and an optional '.' char:
> 100 A
> 200 A
> Also my ID should not contain any underline character and should look
> something like:  
> ETMF001
> or 
> ETMF-001
> or similar format without underline char.
> However, when a label is created in BioPortal with a number and an alpha
> char it contains curly braces surrounding the label and the ID:  {etmf_001,
> '100 A'}
> Again, my main objective is to get a number and an alpha char to show up in
> the BP Preferred Name without the curly braces and the ID...Thank you in
> advance for your help.
> -----
> Zachariah Schmidt
> SterlingBio
> --
> View this message in context:
> Sent from the NCBO Support mailing list archive at
> _______________________________________________
> bioontology-support mailing list
> bioontology-support at

More information about the bioontology-support mailing list