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[bioontology-support] bug in provisional term update

Jim Balhoff balhoff at nescent.org
Tue Jul 10 12:29:10 PDT 2012


Okay, thank you, it's working for me now! That isn't how I expected PUT to work, but this is no problem. For some reason I thought I tried this configuration, but I guess not.

Thanks,
Jim

On Jul 10, 2012, at 3:22 PM, Trish Whetzel wrote:

> Paul just mentioned to me that all of the parameters need to be part of the call, therefore the format below returns a success response and sets the permanentid value.
> 
> curl -X PUT --header "Content-Type:application/x-www-form-urlencoded" 'http://rest.bioontology.org/bioportal/provisional?apikey=XXX&termid=http%3A%2F%2Fpurl.bioontology.org%2Fontology%2Fprovisional%2F8e06127d-df18-477b-88ef-fca750f370ad&permanentid=http%3A%2F%2Fpurl.obolibrary.org%2Fobo%2FTAO_0000107'
> 
> Trish 
> 
> 
> On Jul 10, 2012, at 11:42 AM, Jim Balhoff wrote:
> 
>> Yes, this does return success for me also. But, as you say it appears that the permanentid field is not being set.
>> 
>> Thanks,
>> Jim
>> 
>> On Jul 10, 2012, at 2:39 PM, Trish Whetzel wrote:
>> 
>>> Hi Jim, 
>>> 
>>> Merging threads here - did the format below not generate a successful call? 
>>> 
>>> Paul, while the call below (modulo using a valid API Key) did result in a successful call, the value of the permanentid field did not appear to be set.
>>> 
>>> Trish 
>>> 
>>> 
>>> 
>>> On Jul 9, 2012, at 4:05 PM, Trish Whetzel wrote:
>>> 
>>>> The format below returns a success message:
>>>> curl -X PUT --header "Content-Type:application/x-www-form-urlencoded" -d 'permanentid=http%3A%2F%2Fpurl.obolibrary.org%2Fobo%2FTAO_0000107' 'http://rest.bioontology.org/bioportal/provisional?apikey=XXX&termid=http%3A%2F%2Fpurl.bioontology.org%2Fontology%2Fprovisional%2F8e06127d-df18-477b-88ef-fca750f370ad'
>>>> 
>>>> I've seen with the POST method that the Web service call needs to include the API Key and any other required parameters as part of the call and then the optional parameter/value pairs in the "data" section in CURL or in the "Representation" section using the HTTP Resource Test Firefox Add-on. 
>>>> 
>>>> One item that does not seem to be working though is populating or at least returning the new value set for the provisionalPermanentId. I'll have to talk to Paul tomorrow when he is back in the office about this.  
>>>> 
>>>> Trish
>>> 
>>> 
>>> 
>> 
>> ____________________________________________
>> James P. Balhoff, Ph.D.
>> National Evolutionary Synthesis Center
>> 2024 West Main St., Suite A200
>> Durham, NC 27705
>> USA
>> 
>> 
>> 
> 

____________________________________________
James P. Balhoff, Ph.D.
National Evolutionary Synthesis Center
2024 West Main St., Suite A200
Durham, NC 27705
USA





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