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[bioontology-support] [BioPortal] Human Phenotype Ontology Parsing Failed

Trish Whetzel whetzel at stanford.edu
Wed Jul 11 08:03:09 PDT 2012


I don't have access to those logs from BioPortal, other than the status message. Therefore one of the developers will need to review this further. 

Trish 


On Jul 11, 2012, at 2:52 AM, Robinson, Peter wrote:

> Hi Trish,
> that is funny because OBO Edit does not show any error. Could you send me the exact error you see?
> -Peter
> 
> 
> PD Dr. med. Peter N. Robinson, MSc.
> Institut für Medizinische Genetik und Humangenetik
> Charité - Universitätsmedizin Berlin
> Augustenburger Platz 1
> 13353 Berlin
> Germany
> +4930 450566006
> Mobile: 0160 93769872
> peter.robinson at charite.de
> http://compbio.charite.de
> http://www.human-phenotype-ontology.org
> Introduction to Bio-Ontologies: http://www.crcpress.com/product/isbn/9781439836651
> ________________________________________
> Von: Trish Whetzel [whetzel at stanford.edu]
> Gesendet: Mittwoch, 11. Juli 2012 11:31
> An: Robinson, Peter
> Cc: support at bioontology.org; sebastian.bauer at charite.de; sebastian.koehler at charite.de
> Betreff: Re: [bioontology-support] [BioPortal] Human Phenotype Ontology Parsing Failed
> 
> Hi Peter,
> 
> Thanks for the note. It looks like new versions of HP continue to have a parsing error which the developers will look into further.
> 
> Trish
> 
> 
> On Jun 28, 2012, at 10:34 PM, Robinson, Peter wrote:
> 
>> Hi BioPortal team,
>> we would be happy to help you if you give us a look at the error message!
>> -Peter
>> 
>> 
>> 
>> PD Dr. med. Peter N. Robinson, MSc.
>> Institut für Medizinische Genetik und Humangenetik
>> Charité - Universitätsmedizin Berlin
>> Augustenburger Platz 1
>> 13353 Berlin
>> Germany
>> +4930 450566006
>> Mobile: 0160 93769872
>> peter.robinson at charite.de
>> http://compbio.charite.de
>> http://www.human-phenotype-ontology.org
>> Introduction to Bio-Ontologies: http://www.crcpress.com/product/isbn/9781439836651
>> ________________________________________
>> Von: support at bioontology.org [support at bioontology.org]
>> Gesendet: Freitag, 29. Juni 2012 03:30
>> An: Robinson, Peter
>> Betreff: [BioPortal] Human Phenotype Ontology Parsing Failed
>> 
>> Human Phenotype Ontology parsing failed.
>> 
>> The BioPortal team is investigating the issue.
>> 
>> Please contact support at bioontology.org if you have questions.
>> 
>> Thank you,
>> The BioPortal Team
>> _______________________________________________
>> bioontology-support mailing list
>> bioontology-support at lists.stanford.edu
>> https://mailman.stanford.edu/mailman/listinfo/bioontology-support
> 



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