Search Mailing List Archives

Limit search to: Subject & Body Subject Author
Sort by: Reverse Sort
Limit to: All This Week Last Week This Month Last Month
Select Date Range     through    

[bioontology-support] Problem with annotation

Tyler Cole tylcole at
Thu Jul 12 16:09:57 PDT 2012


I've run into an issue with the Annotator, and it appears to no be working
as in the past. To replicate my issue:

   1. Go here
   2. Click on "Insert sample text" on the top right above the text box
   3. Put SNOMEDCT as the ontology
   4. Put
      - Disease or Syndrome (T047)<>
      - Neoplastic Process (T191)<>
   as the semantic types
   5. Nothing shows up.
   6. I tried the semantic type like this with UMLS, and still nothing:
      - Disease or Syndrome (T047)<>
      - Neoplastic Process (T191)<>
      - UMLS concept (T000) <>

   7. But then the terms show up with this, but a lot of junk is there too
      - NCBO BioPortal concept

The same thing happens using the client service.

Thank you,
Tyler Cole

Tyler Cole
-------------- next part --------------
An HTML attachment was scrubbed...
URL: <>

More information about the bioontology-support mailing list