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[bioontology-support] Problem with annotation

Trish Whetzel whetzel at stanford.edu
Thu Jul 12 17:19:50 PDT 2012


Hi Tyler, 

I've confirmed the issue and submitted a bug report. 

Trish 



On Jul 12, 2012, at 4:10 PM, Tyler Cole <tylcole at stanford.edu> wrote:

> Hello,
> 
> I've run into an issue with the Annotator, and it appears to no be working as in the past. To replicate my issue:
> 
> Go here  http://bioportal.bioontology.org/annotator
> Click on "Insert sample text" on the top right above the text box
> Put SNOMEDCT as the ontology
> Put 
> Disease or Syndrome (T047)
> Neoplastic Process (T191)
> as the semantic types
> Nothing shows up.
> I tried the semantic type like this with UMLS, and still nothing:
> Disease or Syndrome (T047)
> Neoplastic Process (T191)
> UMLS concept (T000)
> 
> But then the terms show up with this, but a lot of junk is there too
> NCBO BioPortal concept (T999)
> 
> The same thing happens using the client service.
> 
> Thank you,
> Tyler Cole
> 
> 
> -- 
> Tyler Cole
> _______________________________________________
> bioontology-support mailing list
> bioontology-support at lists.stanford.edu
> https://mailman.stanford.edu/mailman/listinfo/bioontology-support
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