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[bioontology-support] Searching for a term in SNOMED

Trish Whetzel whetzel at stanford.edu
Mon Jul 30 11:34:39 PDT 2012


Thanks Paul. Is there a QA process in place to ensure that all terms in an ontology are included in the Search index?

Trish 


On Jul 28, 2012, at 8:52 PM, Paul R Alexander wrote:

> The index has been updated and the term is now available.
> 
> Paul R Alexander
> Senior Software Engineer
> NCBO BioPortal
> Stanford Center for Biomedical Informatics Research
> 
> 
> On Fri Jul 27 14:23:58 2012, Trish Whetzel wrote:
>> Hi Simona,
>> 
>> I am able to confirm the results you mention and access the term
>> "Macrolide" using the link for the "Macrolide" parent term displayed
>> on "Macrolide (class of antibiotic, substance)" [1].
>> 
>> Paul, would it make sense to re-index SNOMEDCT as a first step to
>> resolving this issue?
>> 
>> Trish
>> 
>> [1]
>> http://bioportal.bioontology.org/ontologies/46896/?p=terms&conceptid=372480009
>> 
>> 
>> On Jul 27, 2012, at 10:46 PM, Carini, Simona wrote:
>> 
>>> Can anybody explain the behavior I am seeing when I search SNOMED for
>>> the term: macrolide?
>>> Whether I type the term in the Jump To field or I use the search in
>>> ontologies function restricted to SNOMED, the
>>> term Macrolide with ID428787002
>>> is not returned.
>>> However, the term is there and I can see it if I select, "Macrolide
>>> (class of antibiotic, substance)" - ID 372480009 - and then I click
>>> on visualization.
>>> 
>>> Thank you.
>>> Simona
>>> 
>>> 
>>> 
>>> _______________________________________________
>>> bioontology-support mailing list
>>> bioontology-support at lists.stanford.edu
>>> <mailto:bioontology-support at lists.stanford.edu>
>>> https://mailman.stanford.edu/mailman/listinfo/bioontology-support
>> 
>> 
>> 
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