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[bioontology-support] loaderBigConcepts issue in Annotation services (applaince 0.5)

Madani,Sina AHMadani at mdanderson.org
Thu Jun 14 08:40:42 PDT 2012


Hi,

I just added a small ontology to the Annotation services in our local 0.5 instance. At the "loaderBigConepts" step, the status starts from 11 (after successful check of initial status of 3) but remains at status 12.
The last three lines of catalina log is pasted below. After "pagenum 5"  I am getting a strange "Roots...." message

I was able to add the same ontology into 0.4 annotation instance though. The loaderBigConcepts successfully finishes with status 14 and then loaderBigpaths works it to status 28.
This could be a possible bug in version 0.5?


Thanks
Sina


INFO: 2012-06-14     03:09:01      127.0.0.1     -      127.0.0.1     8080   GET       /bioportal/concepts/10001/all      pagenum=4&pagesize=500&apikey=11111111-9dd1-11e0-a996-115056bd0024  200    5677709       0      1748   http://localhost:8080       BioPortal-OBS -
Jun 14, 2012 3:09:04 AM org.restlet.engine.log.LogFilter afterHandle
INFO: 2012-06-14     03:09:04      127.0.0.1     -      127.0.0.1     8080   GET       /bioportal/concepts/10001/all      pagenum=5&pagesize=500&apikey=11111111-9dd1-11e0-a996-115056bd0024  200    517999 0      117    http://localhost:8080       BioPortal-OBS -
Jun 14, 2012 3:09:07 AM org.restlet.engine.log.LogFilter afterHandle
INFO: 2012-06-14     03:09:07      127.0.0.1     -      127.0.0.1     8080   GET       /bioportal/concepts/10001/root     apikey=11111111-9dd1-11e0-a996-115056bd0024      200    14445  0       56     http://localhost:8080       BioPortal-OBS -


       Roots ..

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