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[bioontology-support] Fwd: IDO, etc. problem with definitions

Lindsay Cowell Lindsay.Cowell at UTSouthwestern.edu
Sun May 6 16:54:44 PDT 2012


Hi Trish,

Sorry for the delayed response.  Yes IDO use the IAO term "definition" which is assigned to the PURL you give below.

Thanks,

Lindsay
On Apr 11, 2012, at 11:09 AM, Trish Whetzel wrote:

Hi Barry,

The property specified for the definitions in IDO is:
http://purl.obolibrary.org/obo/IAO_0000115
I'll run some additional checks to confirm the definition count.

In the meantime, Lindsay is http://purl.obolibrary.org/obo/IAO_0000115 the property for definitions in IDO?

Trish


On Apr 5, 2012, at 2:01 PM, Barry Smith wrote:

I notice that IDO is said to have 184 terms without definitions. I believe that the reason for this is that Bioportal does not recognize the 'has_definition' label, which is what IDO (and OGMS, and OBI, and BFO ...) uses to link a term to its definition. Can you include this annotation property in your  count of classes with definitions?
BS
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Lindsay G. Cowell, PhD
Division of Biomedical Informatics
Department of Clinical Sciences
University of Texas Southwestern Medical Center at Dallas
5323 Harry Hines Blvd.
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phone: 214-648-2289
fax: 214-648-2064
Lindsay.Cowell at utsouthwestern.edu<mailto:Lindsay.Cowell at utsouthwestern.edu>


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