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[bioontology-support] Help with expression (cutoff)

Rob Wynden rob.wynden at ucsf.edu
Wed May 9 09:22:52 PDT 2012


I think that we may be triggering an escape character on the page.  Is
that correct?
Rob


On 5/9/12 8:57 AM, Mobed, Ketty wrote:
> Hi Trish,
>
> here is a problem that I have run into. I have attached the Protege
> generated .owl file for HOM-ORTHO (BP ID# 1697). When you open up the
> Protege owl file and click on the left to open OrthoSurgery ->
> Diagnoses -> Comorbidities -> Anemia, then on the right hand side the
> expression for HOM-BOOL1 reads (I9CM>I9CM.2799 AND I9CM<I9CM.2860),
> and this is correct. Now when I upload the HOM-ORTHO.owl file to BP,
> then when you expand the ontology to Anemia you see that Hom Bool1 was
> cut-off and only reads (I9CM>I9CM.2799 AND I9CM  .
>
> Why is this? This is the SQLite syntax that we need to process our HOM
> translator. Any help will be appreciated.
>
> Thanks,
> Ketty
>
> 'It's the little things that matter'
>
> Ketty Mobed, PhD
> UCSF-IHPS-Informatics Lab
> ketty.mobed at ucsf.edu
> 415-352-8815
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