[bioontology-support] virtualization tool for Ontology

[Trish Whetzel]

The current ontology visualization graphs are displayed using FlexViz developed by our collaborators at the University of Victoria. However, we plan to move to displaying ontology visualizations using Bio-Mixer, also developed by the same group. Both projects are described here: http://www.thechiselgroup.com/projects

There is an ontology graph visualization widget available for all ontologies on BioPortal. For ICD, the widget page is at: http://bioportal.bioontology.org/ontologies/47178/?p=widgets

Trish 


On May 9, 2012, at 10:54 AM, Suzhi Wang wrote:

> Version:          v2.3.5, November 9th, 2010
> Operating System: Windows XP 64
> Flash Version:    WIN 11,1,102,63
> Flash Parameters: log=true&ontology=44450&redirecturl=&virtual=false&server=&nodeid=&v=2.3.6
> Browser URL:      http://bioportal.bioontology.org/flex/FlexoViz.html?v=1.1.7
>  
>  
> Hello,
>  
> I have a question about your virtualization tool for Ontology, http://bioportal.bioontology.org/ontologies/47178/?p=terms&conceptid=06.
>  
> We would like to set up a online Ontology Editor for our project. We installed Webprotege 2011.05.28 successfully. Now we are trying to install a tool for graph virtualization of Ontology terms. We like the virtualization tool on your website. Would you please tell us how do you set it up? Which version of protege/webprotege you use? And which plugin do I need to install?
>  
> I appreciate if you could help!
>  
> Thanks you,
>  
> Suzhi Wang
> Division of Biostatistics
> Washington University in St. Louis
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> bioontology-support at lists.stanford.edu
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