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[bioontology-support] The option 'includedefinitions' in Search services?

Dan Bolser dan.bolser at gmail.com
Sun Nov 11 11:06:04 PST 2012


Many thanks Trish!

On 9 November 2012 22:08, Trish Whetzel <whetzel at stanford.edu> wrote:
> Hi Dan,
>
> Yes, the 'includedefinitions' parameter should have an effect. For example searching with the term biological process from GO
> returns the term definition:
> http://rest.bioontology.org/bioportal/search/?ontologyids=1070&query=biological_process&isexactmatch=true&includedefinitions=true&apikey=YourAPIKey
>
> There appears to be a bug in returning the definition for terms in EDAM, which has been reported for the developers to investigate further.
>
> Trish
>
>
>
> On Nov 8, 2012, at 5:50 PM, Dan Bolser wrote:
>
>> Does this option have any effect? I can't see a difference here:
>>
>> http://rest.bioontology.org/bioportal/search/?ontologyids=1498&query=Transcriptomics&isexactmatch=true&apikey=yes
>> http://rest.bioontology.org/bioportal/search/?ontologyids=1498&query=Transcriptomics&isexactmatch=true&includedefinitions=true&apikey=yes
>> http://rest.bioontology.org/bioportal/search/?ontologyids=1498&query=Transcriptomics&isexactmatch=true&includedefinitions=false&apikey=yes
>>
>> As described here:
>> http://www.bioontology.org/wiki/index.php/BioPortal_REST_services#Search_BioPortal
>>
>>
>> Cheers,
>> Dan.
>> _______________________________________________
>> bioontology-support mailing list
>> bioontology-support at lists.stanford.edu
>> https://mailman.stanford.edu/mailman/listinfo/bioontology-support
>


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