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[bioontology-support] Gap in term services?

Trish Whetzel whetzel at stanford.edu
Mon Apr 1 12:08:47 PDT 2013


In this case, the ontology abbreviation is included as part of the "conceptid", therefore either the abbreviation also needs to be included as part of the conceptid:
http://rest.bioontology.org/bioportal/virtual/ontology/1086?conceptid=ODGI%3ACharacterized&apikey=<apikey>
OR 
the preferred method is to use the full Id of the term (URL encoded) in the call formatted as:
http://rest.bioontology.org/bioportal/virtual/ontology/1086?conceptid=http%3A%2F%2Fpurl.obolibrary.org%2Fobo%2FODGI.owl%23Characterized&apikey=<apikey>

Trish 


On Mar 27, 2013, at 2:32 PM, Colin Morris wrote:

> Hi,
> 
> One of the concepts I got as output from the NCBO annotator was term 'Characterized' in ontology 39579 (ODGI - virtual ontology id 1086). 
> 
> But using the 'alt virtual signature' described in the documentation (http://www.bioontology.org/wiki/index.php/NCBO_REST_services#Term_services) to build a url for this concept gives me a 404:
> 
> http://rest.bioontology.org/bioportal/virtual/ontology/1086?conceptid=Characterized&apikey=<apikey>
> 
> Can you think of any reason why this would be?
> 
> Thanks,
> Colin
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> bioontology-support at lists.stanford.edu
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