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[bioontology-support] Minor load issues with EFO

James Malone malone at ebi.ac.uk
Thu Aug 15 03:16:15 PDT 2013


Hi,

Any updates on this?

Cheers,

James

On 10/08/2013 01:43, Ray Fergerson wrote:
> Forwarding this to our Protégé expert, Tim. He has explained to me before
> what causes this but I can't seem to remember the explanation for more
> than 15 minutes. Perhaps if he documents it here I can come back to it...
>
> Tim?
>
> Ray
>
> -----Original Message-----
> From: bioontology-support-bounces at lists.stanford.edu
> [mailto:bioontology-support-bounces at lists.stanford.edu] On Behalf Of James
> Malone
> Sent: Friday, August 09, 2013 1:40 AM
> To: support at bioontology.org Support
> Subject: [bioontology-support] Minor load issues with EFO
>
> Hi,
>
> There seems to be a bit of weirdness in the EFO hierarchy as visible in
> BioPortal. At top level, two additional classes are showing 'expand
> expression to' (from IAO) and 'has_scope' (from OBO in OWL) which are both
> annotation properties. Not sure whey they are showing there.
>
> Thanks,
>
> James
>
> --
> Blog: http://jamesmaloneebi.blogspot.co.uk/
> Twitter: https://twitter.com/jamesmalone
>
> European Bioinformatics Institute,
> Wellcome Trust Genome Campus,
> Cambridge, CB10 1SD,
> United Kingdom
> Tel: + 44 (0) 1223 494 676
> Fax: + 44 (0) 1223 494 468
>
> _______________________________________________
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> bioontology-support at lists.stanford.edu
> https://mailman.stanford.edu/mailman/listinfo/bioontology-support

-- 
Blog: http://jamesmaloneebi.blogspot.co.uk/
Twitter: https://twitter.com/jamesmalone

European Bioinformatics Institute,
Wellcome Trust Genome Campus,
Cambridge, CB10 1SD,
United Kingdom
Tel: + 44 (0) 1223 494 676
Fax: + 44 (0) 1223 494 468



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