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[bioontology-support] Visualization tab

Erick Antezana erick.antezana at gmail.com
Fri Feb 22 01:47:46 PST 2013


Hi,

does it mean that my local bioportal (appliance) is sending some data so
that the visualisation could be rendered? My users are a bit paranoid with
their data/ontologies. This could be an issue...if so, is there a way to
close/block it without loosing functionalities?

cheers,
Erick


On 7 February 2013 19:49, Eric Verbeek <eric.l.verbeek at gmail.com> wrote:

>  Hi Sina and Ray,
>
> The visualization is in JavaScript, and makes calls to the REST services
> from there to the public BioPortal servers. I haven't worked with the VM
> yet. Does the VM have internet access? Does the configuration for BioPortal
> in the VM have different connectivity paths or requirements to the REST
> servers than the visualization uses?
>
> Sina, could you check a JavaScript error log or developer console for
> errors? If you are using Chrome, you can access it with Ctrl-Shift-J, or
> through Chrome's menu (the one with three stacked horizontal lines, on all
> OSes). There might be some hints for me in the JS errors.
>
> ~Eric
>
>
> On 07/02/2013 10:32 AM, Ray Fergerson wrote:
>
>  Sina,****
>
> ** **
>
> Copying Eric (the visualization guy). I don’t understand this at all. I
> can confirm that difference between what you see in your VM and what we
> see. I believe that we are all pointing that the same instance of the
> visualization software though.****
>
> ** **
>
> Eric, any idea why this is happening? What would cause this visualization
> configuration item to not show up?****
>
> ** **
>
> Ray****
>
> ** **
>
> *From:* bioontology-support-bounces at lists.stanford.edu [
> mailto:bioontology-support-bounces at lists.stanford.edu<bioontology-support-bounces at lists.stanford.edu>]
> *On Behalf Of *Madani,Sina
> *Sent:* Thursday, February 07, 2013 5:56 AM
> *To:* support at bioontology.org
> *Cc:* Riben,Michael Warren
> *Subject:* [bioontology-support] Visualization tab****
>
> ** **
>
> Hi, ****
>
> We noticed that the visualization widget of our local instance is not
> working properly. Comparing to your environment, apparently the “Show
> SNOMED Clinical term” from the drop down configuration menu is missing in
> our instance’s UI.****
>
> Is there a configuration file that I can set this in order to
> operationalize the Visualization tab? ****
>
> ** **
>
> Thanks!****
>
> Sina****
>
> ** **
>
> ** **
>
> ** **
>
> *Our local instance*
>
> ****
>
> ** **
>
> ** **
>
> ** **
>
> *Stanford instance *
>
> ** **
>
> ****
>
>
>
> _______________________________________________
> bioontology-support mailing list
> bioontology-support at lists.stanford.edu
> https://mailman.stanford.edu/mailman/listinfo/bioontology-support
>
>
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