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[bioontology-support] access to private ontology

Michel Dumontier michel.dumontier at gmail.com
Tue Jan 8 12:59:31 PST 2013


Hi Trish,
  I've cc'd Eric Sadou into the conversation. He says that the web
bioportal view is unlocked, but not the webservices..

m.

On Tue, Jan 8, 2013 at 2:11 PM, Trish Whetzel <whetzel at stanford.edu> wrote:

> How soon does the other user need access to the ontology?
>
> Trish
>
>
> On Jan 8, 2013, at 11:02 AM, Michel Dumontier wrote:
>
> Hi,
>  I don't have access to the admin tab either...
>
> we also have to add another account 'ouagne'
>
> i'll ask them to try
>
> m.
>
> On Tue, Jan 8, 2013 at 1:54 PM, Trish Whetzel <whetzel at stanford.edu>wrote:
>
>> I was able to grant 'roky76' permission to the ontology via the "Admin"
>> tab and it looks like this was *committed *based on the "Get metadata
>> for a specific ontology version" web service call [1]. However the Web
>> interface no longer displays the "Admin" tab for my account so I can not do
>> any further testing. The issue with granting users access to an ontology is
>> reported here [2].
>>
>> In the meantime, is the user now able to access the ontology via the Web
>> and Web services?
>>
>> Trish
>>
>> [1]
>> http://www.bioontology.org/wiki/index.php/NCBO_REST_services#Get_a_specific_ontology_based_on_a_version_id
>>
>> [2]
>> https://bmir-gforge.stanford.edu/gf/project/ncbo/tracker/?action=TrackerItemEdit&tracker_item_id=4382&start=0
>>
>>
>> On Jan 8, 2013, at 10:21 AM, Michel Dumontier wrote:
>>
>> Hi,
>>   Ok, I have tried to update the admin page, but no information appears
>> to be saved.
>>
>> if i add the colleagues id 'roky76', it appears as an added account, but
>> when i click on update, then go back, it's gone. same if i try to just
>> updated the ontology version from 1.0 to 1.0.1
>>
>>
>> m.
>>
>> On Mon, Jan 7, 2013 at 12:46 PM, Trish Whetzel <whetzel at stanford.edu>wrote:
>>
>>> Hi Michel,
>>>
>>> Once logged into BioPortal, from the ontology summary page [1] click on
>>> the "Administer" menu and then select "Edit Ontology Metadata". On the new
>>> page in the section "Ontology Viewing Restrictions" add the BioPortal
>>> username of the individual you would like to grant permission to access ATC.
>>>
>>> HNY2013!
>>> Trish
>>>
>>> [1] http://bioportal.bioontology.org/ontologies/3021
>>>
>>>
>>> On Jan 7, 2013, at 8:06 AM, Michel Dumontier wrote:
>>>
>>> Hi BioPortal team!
>>>
>>>  Happy New Year!
>>>
>>>  I have a request from an individual to make use of my *private* ATC
>>> ontology through the BioPortal web services. I'm more than happy to allow
>>> them to access the ontology, but how do we configure it?
>>>
>>> m.
>>>
>>> --
>>> Michel Dumontier
>>> Associate Professor of Bioinformatics, Carleton University
>>> Chair, W3C Semantic Web for Health Care and the Life Sciences Interest
>>> Group
>>> http://dumontierlab.com
>>>  _______________________________________________
>>> bioontology-support mailing list
>>> bioontology-support at lists.stanford.edu
>>> https://mailman.stanford.edu/mailman/listinfo/bioontology-support
>>>
>>>
>>>
>>
>>
>> --
>> Michel Dumontier
>> Associate Professor of Bioinformatics, Carleton University
>> Chair, W3C Semantic Web for Health Care and the Life Sciences Interest
>> Group
>> http://dumontierlab.com
>>
>>
>>
>
>
> --
> Michel Dumontier
> Associate Professor of Bioinformatics, Carleton University
> Chair, W3C Semantic Web for Health Care and the Life Sciences Interest
> Group
> http://dumontierlab.com
>
>
>


-- 
Michel Dumontier
Associate Professor of Bioinformatics, Carleton University
Chair, W3C Semantic Web for Health Care and the Life Sciences Interest Group
http://dumontierlab.com
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