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[bioontology-support] parsing error

Paul R Alexander palexander at stanford.edu
Wed Jan 9 15:15:27 PST 2013


Jonathan,

Can you tell me what file you uploaded for IC9CM? Was it a zip file containing multiple RRF files?

Paul


On Jan 9, 2013, at 3:04 PM, "Holt, Jonathan" <jonathan.holt at Vanderbilt.Edu> wrote:

> I have recently tried to get my ncbo virtual appliance back up and running. 
> 
> So, I tried to import some ontologies from the bioportal to my own hosted vm, but got a parsing error. 
> 
> I also tried to manually and still got a java error. 
> 
> 
> see attached.
> 
> 
> Any thoughts?
> 
> 
> Jonathan
> 
> 
> 
> <Screen Shot 2013-01-09 at 4.59.24 PM.png>
> 
> <Screen Shot 2013-01-09 at 2.18.41 PM.png><Screen Shot 2013-01-09 at 4.59.08 PM.png>
> 
> 
> 
> 
> 
> .................................
> Jonathan Holt, DO, MS
> 
> Assistant Professor of Biomedical Informatics and Medicine
> Departments of Biomedical Informatics & Medicine, Division of Genetic Medicine
> Vanderbilt University Medical Center
> 2209 Garland Ave
> 412 Eskind Biomedical Library
> Nashville, TN  37232-8340
> Phone:  615-322-8683
> Fax: 615-936-1427
> 
> jonathan.holt at vanderbilt.edu
> http://dbmi.mc.vanderbilt.edu/people/holt.html
> 
> 
> 
> 
> 
> 
> 
> 
> 
> _______________________________________________
> bioontology-support mailing list
> bioontology-support at lists.stanford.edu
> https://mailman.stanford.edu/mailman/listinfo/bioontology-support

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