Search Mailing List Archives


Limit search to: Subject & Body Subject Author
Sort by: Reverse Sort
Limit to: All This Week Last Week This Month Last Month
Select Date Range     through    

[bioontology-support] NCBO Annotator Service parameter isVirtualOntologyId not working as expected.

Patrice Seyed apseyed at gmail.com
Thu Jul 18 09:00:38 PDT 2013


Thanks Ray, we appreciate your time and expertise. We are sort of at
your mercy at this point as the paper   (due Friday evening) and
described data/evaluation highlights usage of the NCBO annotator.

Cheers,
Patrice

On Wed, Jul 17, 2013 at 3:10 PM, Ray Fergerson
<ray.fergerson at stanford.edu> wrote:
> Zach,
>
>
>
> Your diagnosis is correct. The version of GAZ available in the Annotator is
> only partial, due to a corrupt download. We are fixing this but it may take
> a day or two to update the database used by the annotator so that it uses
> version 47282 since this version has over a half a million terms. I will let
> you know when this is complete.
>
>
>
> Ray
>
>
>
>
>
> I want to load concepts from the version 47282, and my diagnosis is that the
> Annotator Service is not returning concepts for this version.
>
>
>
> Is there a quick fix for this? I am in the middle of writing a paper that
> has a deadline relatively soon.
>
>
>
>



-- 
Patrice Seyed
DataONE Postdoctoral Fellow, University of New Mexico &
Tetherless World Constellation, Rensselaer Polytechnic Institute
http://www.dataone.org/working_groups/data-integration-and-semantics
http://tw.rpi.edu/web/person/PatriceSeyed


More information about the bioontology-support mailing list