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[bioontology-support] [BioPortal] Feedback from Karen Yook

Karen Yook kyook at wormbase.org
Tue Jun 11 15:51:03 PDT 2013


Hi Ray,

All of the elegans ontologies are created and maintained by individual
curators at WormBase (cc'd on this message).  I will leave it to them to
contact you for admin rights to make sure their ontologies are categorized
correctly.

Thank you,
Karen

On Tue, Jun 11, 2013 at 3:43 PM, Ray Fergerson
<ray.fergerson at stanford.edu>wrote:

> If you are the submitter of the ontology then you can login and edit the
> metadata (you will see an “Administrator” link on the ontology summary
> page), including the categories. If you are not the owner of the ontology
> then you cannot edit this information but we can do it if the request seems
> reasonable. There is some caching so the change does not show up
> immediately in the UI. It may take an hour or so.****
>
> ** **
>
> Ray****
>
> ** **
>
> *From:* Karen Yook [mailto:kyook at wormbase.org]
> *Sent:* Tuesday, June 11, 2013 3:39 PM
> *To:* Ray Fergerson; Raymond L
> *Cc:* support at bioontology.org
> *Subject:* Re: [bioontology-support] [BioPortal] Feedback from Karen Yook*
> ***
>
> ** **
>
> Hi Ray,
>
> Thank you for getting back to me so fast.  Is there something on our end
> that we needed to do to make sure the categories are set properly?
>
> Thanks again for your help.
> Karen ****
>
> On Tue, Jun 11, 2013 at 3:32 PM, Ray Fergerson <ray.fergerson at stanford.edu>
> wrote:****
>
> Karen,
>
> This is fixed now. I believe that this ontology was submitted without
> these categories being set.  In any case I have set them now and they
> appear to filter as expected.
>
> Ray****
>
>
> -----Original Message-----
> From: bioontology-support-bounces at lists.stanford.edu
> [mailto:bioontology-support-bounces at lists.stanford.edu] On Behalf Of
> support at bioontology.org
> Sent: Tuesday, June 11, 2013 12:10 PM
> To: support at bioontology.org; karen at wormbase.org
> Subject: [bioontology-support] [BioPortal] Feedback from Karen Yook
>
>
> Name: Karen Yook
>
> Email: karen at wormbase.org
>
> Location: http://bioportal.bioontology.org/ontologies
>
> Comment:
> It seems that the C. elegans gross anatomy onotology is not showing up on
> filtered lists unless the entire onotology list is filtered by 'elegans'.
> It should be showing up in the 'gross anatomy', 'animal anatomy', and
> 'animal gross anatomy' category filtered results. Thanks for your help.***
> *
>
> _______________________________________________
> bioontology-support mailing list
> bioontology-support at lists.stanford.edu
> https://mailman.stanford.edu/mailman/listinfo/bioontology-support****
>
>
>
>
> --
> ~~~~
> Karen Yook
>
> Curator
> WormBase Caltech
> Tel: 626.395.5878
> e-mail: kyook at caltech.edu
> e-mail: kyook at wormbase.org
> skype name: wbkaren ****
>



-- 
~~~~
Karen Yook

Curator
WormBase Caltech
Tel: 626.395.5878
e-mail: kyook at caltech.edu
e-mail: kyook at wormbase.org
skype name: wbkaren
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