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[bioontology-support] [BioPortal] Feedback from Richard Scheuermann

Trish Whetzel whetzel at stanford.edu
Fri May 17 18:08:15 PDT 2013


Yes, I'll double-check what the PURL is set to resolve to as well as review the GAZ parsing error.

Trish 


On May 17, 2013, at 6:01 PM, Scheuermann, Richard wrote:

> There we go.  Thanks Trish!  Probably need to fix the other link.
> 
> Cheers,
> 
> Richard
> 
> --------------------------------------------
> Richard H. Scheuermann, Ph.D.
> Director of Informatics
> J. Craig Venter Institute
> 10355 Science Center Dr.
> San Diego, CA 92121
> 
> rscheuermann at jcvi.org
> 858-200-1876
> 
> 
> From: Trish Whetzel <whetzel at stanford.edu>
> Date: Friday, May 17, 2013 6:01 PM
> To: "Richard H. Scheuermann" <rscheuermann at jcvi.org>
> Cc: "support at bioontology.org" <support at bioontology.org>
> Subject: Re: [bioontology-support] [BioPortal] Feedback from Richard Scheuermann
> 
>> Thanks, that is more clear. To access the latest version of GAZ that parsed successfully, please click on the link "$Revision: 1.512 $" in the Versions table, screenshot attached. 
>> 
>> Trish 
>>  
>> 
>> 
>> 
>> 
>> On May 17, 2013, at 5:48 PM, Scheuermann, Richard wrote:
>> 
>>> If I click on the BioPortal PURL link on the Gazetteer summary page, and
>>> try to enter a term in the Jump to: box, I get a pop up (see attachment)
>>> and can't enter anything into the text box.
>>> 
>>> 
>>> --------------------------------------------
>>> Richard H. Scheuermann, Ph.D.
>>> Director of Informatics
>>> J. Craig Venter Institute
>>> 10355 Science Center Dr.
>>> San Diego, CA 92121
>>> 
>>> rscheuermann at jcvi.org
>>> 858-200-1876
>>> 
>>> 
>>> 
>>> 
>>> 
>>> 
>>> On 5/17/13 5:42 PM, "Trish Whetzel" <whetzel at stanford.edu> wrote:
>>> 
>>>> What terms are you using for the search and display? I've tested a few
>>>> terms and were able to find them with the search and display the term
>>>> details.
>>>> 
>>>> Trish 
>>>> 
>>>> 
>>>> 
>>>> On May 17, 2013, at 4:58 PM, support at bioontology.org wrote:
>>>> 
>>>>> 
>>>>> Name: Richard Scheuermann
>>>>> 
>>>>> Email: rscheuermann at jcvi.org
>>>>> 
>>>>> Location: http://bioportal.bioontology.org/search
>>>>> 
>>>>> Comment:
>>>>> GAZ does not seem to be functioning properly.  Can't query or display.
>>>>> _______________________________________________
>>>>> bioontology-support mailing list
>>>>> bioontology-support at lists.stanford.edu
>>>>> https://mailman.stanford.edu/mailman/listinfo/bioontology-support
>>>> 
>>> 
>>> <Screen Shot 2013-05-17 at 5.44.44 PM.png>
>> 

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