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[bioontology-support] Resources with "no classes" [was Re: update to OBO Foundry list of resources]

Ray Fergerson ray.fergerson at stanford.edu
Fri Nov 1 13:41:36 PDT 2013


This is fixed now. All OBO foundry ontologies have a metric that shows
non-zero classes.

Ray

-----Original Message-----
From: Melanie Courtot [mailto:mcourtot at gmail.com]
Sent: Wednesday, October 16, 2013 9:13 AM
To: Ray Fergerson
Cc: support at bioontology.org; Ramona Walls
Subject: Resources with "no classes" [was Re: [bioontology-support] update
to OBO Foundry list of resources]

Thanks Ray!
When I look at the metrics on the
http://bioportal.bioontology.org/ontologies?filter=OBO_Foundry page, I see
however that most of those classes show 0 classes. For example for PR, the
Protein Ontology. Upon checking the details of PR, I see that at
http://bioportal.bioontology.org/ontologies/PR?p=classes it does show
multiple classes (as it should)

Any idea what went wrong?

Thanks,
Melanie


On 2013-10-11, at 2:54 PM, Ray Fergerson wrote:

> Done.
>
> Ray
>
> -----Original Message-----
> From: bioontology-support-bounces at lists.stanford.edu
> [mailto:bioontology-support-bounces at lists.stanford.edu] On Behalf Of
> Melanie Courtot
> Sent: Thursday, October 10, 2013 3:51 PM
> To: support at bioontology.org Support
> Cc: Ramona Walls
> Subject: [bioontology-support] update to OBO Foundry list of resources
>
> Hi,
>
> As shown at [1], two new resources have been promoted to OBO Foundry
> status, the Plant Ontology (PO) and the Ontology for Biomedical
> Investigations (OBI) Could you update their entries so the page at [2]
> reflects those changes?
>
> Cheers,
> Melanie
>
>
> [1]
> http://sourceforge.net/mailarchive/forum.php?thread_name=CAJYF1k5g_pn5
> hwz7
> f5uR3aB380fM68WNg9s4y%3Dq4QLCmpQEb2g%40mail.gmail.com&forum_name=obo-d
> iscu
> ss
> [2] http://bioportal.bioontology.org/ontologies?filter=OBO_Foundry
>
>
> ---
> Mélanie Courtot
> Ph.D. Candidate,
> BCCRC - Terry Fox Laboratory - 12th floor
> 675 West 10th Avenue
> Vancouver, BC
> V5Z 1L3, Canada
>
>
>
>
>
>
>
>
>
>
>
> _______________________________________________
> bioontology-support mailing list
> bioontology-support at lists.stanford.edu
> https://mailman.stanford.edu/mailman/listinfo/bioontology-support



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