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[bioontology-support] Is Bioportal down?

Jie Zheng jiezheng at upenn.edu
Tue Nov 19 11:19:23 PST 2013


Hi Paul,

Thanks!

I saw that in the OBI summary page too.

It's weird that I got error message after I clicked submission button.

Jie


On 11/19/2013 2:17 PM, Paul R Alexander wrote:
> Jie,
>
> It looks like the submission was successful. It is currently queued for processing.
>
> Paul
>
>
> On Nov 19, 2013, at 8:34 AM, Jie Zheng <jiezheng at upenn.edu> wrote:
>
>> Hi Paul,
>>
>> I tried Bioportal today. Finally I can see the submission form. However, new submission failed and the page showed the standard Bioportal error message:
>> "We're sorry but something has gone wrong. We have been notified of this error."
>>
>> Could you please check it? Do you need me to send the new version of OBI owl file? I would like to set the URL for automatically updates. Unfortunately, the OBO PURL server down. I think I'd better not to do it now.
>>
>> Thanks,
>>
>> Jie
>>
>>
>> On 11/18/2013 6:25 PM, Paul R Alexander wrote:
>>> Jie,
>>>
>>> I think it’s now working, at least for the time being. We’re still working on a more permanent solution. Sorry for the trouble.
>>>
>>> Paul
>>>
>>>
>>> On Nov 18, 2013, at 12:23 PM, Jie Zheng <jiezheng at upenn.edu> wrote:
>>>
>>>> Thanks Paul.
>>>>
>>>> Current I can view page:
>>>> http://bioportal.bioontology.org/ontologies/OBI
>>>>
>>>> Since I want to upload new release version of OBI, I clicked 'Add submission' like. I got error message:
>>>> "We're sorry but something has gone wrong. We have been notified of this error."
>>>>
>>>> Same error when I click 'Edit submission information (2012-07-01)' link.
>>>>
>>>> Could you please check it?
>>>>
>>>> In addition, the information under 'Submissions' are empty on the page: http://bioportal.bioontology.org/ontologies/OBI. It means no record of submission history.
>>>>
>>>> Thanks,
>>>>
>>>> Jie
>>>>
>>>>
>>>> On 11/18/2013 2:59 PM, Paul R Alexander wrote:
>>>>> Jie,
>>>>>
>>>>> These appear to be working now. Please let us know if they are still broken for you.
>>>>>
>>>>> Paul
>>>>>
>>>>>
>>>>> On Nov 18, 2013, at 11:21 AM, Jie Zheng <jiezheng at pcbi.upenn.edu> wrote:
>>>>>
>>>>>> I cannot view OBO Foundry ontologies on the Bioportal website.
>>>>>> http://bioportal.bioontology.org/ontologies/OBI
>>>>>> http://bioportal.bioontology.org/ontologies/CHEBI
>>>>>>     Both gave "We're sorry but something has gone wrong. We have been notified of this error." error message.
>>>>>>
>>>>>> Could anyone fix it?
>>>>>>
>>>>>> Thanks!
>>>>>>
>>>>>> Jie
>>>>>>
>>>>>> Jie Zheng
>>>>>> Computational Biology and Informatics Laboratory
>>>>>> Department of Genetics
>>>>>> University of Pennsylvania
>>>>>>
>>>>>> _______________________________________________
>>>>>> bioontology-support mailing list
>>>>>> bioontology-support at lists.stanford.edu
>>>>>> https://mailman.stanford.edu/mailman/listinfo/bioontology-support



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