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[bioontology-support] Is Bioportal down?
Paul R Alexander
palexander at stanford.edu
Tue Nov 19 11:19:43 PST 2013
Yes, I’ll be looking into how that could happen.
Paul
On Nov 19, 2013, at 11:19 AM, Jie Zheng <jiezheng at upenn.edu> wrote:
> Hi Paul,
>
> Thanks!
>
> I saw that in the OBI summary page too.
>
> It's weird that I got error message after I clicked submission button.
>
> Jie
>
>
> On 11/19/2013 2:17 PM, Paul R Alexander wrote:
>> Jie,
>>
>> It looks like the submission was successful. It is currently queued for processing.
>>
>> Paul
>>
>>
>> On Nov 19, 2013, at 8:34 AM, Jie Zheng <jiezheng at upenn.edu> wrote:
>>
>>> Hi Paul,
>>>
>>> I tried Bioportal today. Finally I can see the submission form. However, new submission failed and the page showed the standard Bioportal error message:
>>> "We're sorry but something has gone wrong. We have been notified of this error."
>>>
>>> Could you please check it? Do you need me to send the new version of OBI owl file? I would like to set the URL for automatically updates. Unfortunately, the OBO PURL server down. I think I'd better not to do it now.
>>>
>>> Thanks,
>>>
>>> Jie
>>>
>>>
>>> On 11/18/2013 6:25 PM, Paul R Alexander wrote:
>>>> Jie,
>>>>
>>>> I think it’s now working, at least for the time being. We’re still working on a more permanent solution. Sorry for the trouble.
>>>>
>>>> Paul
>>>>
>>>>
>>>> On Nov 18, 2013, at 12:23 PM, Jie Zheng <jiezheng at upenn.edu> wrote:
>>>>
>>>>> Thanks Paul.
>>>>>
>>>>> Current I can view page:
>>>>> http://bioportal.bioontology.org/ontologies/OBI
>>>>>
>>>>> Since I want to upload new release version of OBI, I clicked 'Add submission' like. I got error message:
>>>>> "We're sorry but something has gone wrong. We have been notified of this error."
>>>>>
>>>>> Same error when I click 'Edit submission information (2012-07-01)' link.
>>>>>
>>>>> Could you please check it?
>>>>>
>>>>> In addition, the information under 'Submissions' are empty on the page: http://bioportal.bioontology.org/ontologies/OBI. It means no record of submission history.
>>>>>
>>>>> Thanks,
>>>>>
>>>>> Jie
>>>>>
>>>>>
>>>>> On 11/18/2013 2:59 PM, Paul R Alexander wrote:
>>>>>> Jie,
>>>>>>
>>>>>> These appear to be working now. Please let us know if they are still broken for you.
>>>>>>
>>>>>> Paul
>>>>>>
>>>>>>
>>>>>> On Nov 18, 2013, at 11:21 AM, Jie Zheng <jiezheng at pcbi.upenn.edu> wrote:
>>>>>>
>>>>>>> I cannot view OBO Foundry ontologies on the Bioportal website.
>>>>>>> http://bioportal.bioontology.org/ontologies/OBI
>>>>>>> http://bioportal.bioontology.org/ontologies/CHEBI
>>>>>>> Both gave "We're sorry but something has gone wrong. We have been notified of this error." error message.
>>>>>>>
>>>>>>> Could anyone fix it?
>>>>>>>
>>>>>>> Thanks!
>>>>>>>
>>>>>>> Jie
>>>>>>>
>>>>>>> Jie Zheng
>>>>>>> Computational Biology and Informatics Laboratory
>>>>>>> Department of Genetics
>>>>>>> University of Pennsylvania
>>>>>>>
>>>>>>> _______________________________________________
>>>>>>> bioontology-support mailing list
>>>>>>> bioontology-support at lists.stanford.edu
>>>>>>> https://mailman.stanford.edu/mailman/listinfo/bioontology-support
>
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